Gene RoseRS_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1813 
Symbol 
ID5208772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2239292 
End bp2240155 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content64% 
IMG OID640595421 
Productalpha/beta hydrolase fold 
Protein accessionYP_001276153 
Protein GI148655948 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.557453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0116174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACT ACCAGCACAT CTGGCTGAAC AACACCACGC TGACATACAT CGATCAGGGG 
CATGGTGCGC CGGTGGTTCT CGTTCACGGC AGCGGACCGA CCGATCTGCG CACATGGGAG
CGGCAGATCG AGCCGTTCGC CGCCCACTTC CGCGTCATTG CCTACAGTCG ACGATGCCAC
TACCCAAACC CGCCTGCCGG TGATCACGCC GATAGTGCTT CAACCCGCAC CCATGCGCGT
GATCTGGCTG CGCTGATCAC TGCGCTCCAG TTGGGACGTG TCCACCTGAT CGGCTTTTCG
TTCGGCGCGG ATATTGTTCT ACGTCTGGCA GTGGATCGTC CTGACCTGGC GCGTACACTT
ACCATCACAG AACCGCCGTT GCACTCGTGG CTCGCCGCGC TGCCCGGCGG GATCGACCTC
CTGGCGCAGC GCGCAGCAGC GATCCTTCCG GCGAAACGCG CCGTGCAGCA GGGCGACCTG
GAACATGGCG CGCGGCTCTT TATCGACGGC ATGATGGGGA ACGGCGTGTT CGATCAACTG
CCGCCATCAG CCCGCCAGCG TATCATGGAC AATGCCCGCC TGATCGGCGC CGAGCCGACA
GAGATCGACG CGATGGGAGC GGAGGACATC ACCCGCAGCG AAGCAGCGAC GATCCAGACG
CCGACGCTCC TGCTCACCGG CGACGCAAGT CCGCCGATGT TCCTGCTCGT CAGCCGGGAA
CTGGCGCGCT ACCTGCCGAA CGTCGAACAG GTGCAGATAC GTGGCGCCTC TCATCTCCTG
CACGTCATGC AACCGCAGGC GTACAACGCG GTTGTTCTGG AGTTTCTGAC CAGGCACGGG
GGTCAGGGGT CCTCTCACGT GTAG
 
Protein sequence
MDNYQHIWLN NTTLTYIDQG HGAPVVLVHG SGPTDLRTWE RQIEPFAAHF RVIAYSRRCH 
YPNPPAGDHA DSASTRTHAR DLAALITALQ LGRVHLIGFS FGADIVLRLA VDRPDLARTL
TITEPPLHSW LAALPGGIDL LAQRAAAILP AKRAVQQGDL EHGARLFIDG MMGNGVFDQL
PPSARQRIMD NARLIGAEPT EIDAMGAEDI TRSEAATIQT PTLLLTGDAS PPMFLLVSRE
LARYLPNVEQ VQIRGASHLL HVMQPQAYNA VVLEFLTRHG GQGSSHV