| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1811 |
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| Symbol | |
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| ID | 5208770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2235558 |
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| End bp | 2237066 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640595419 |
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| Product | phytoene dehydrogenase-related protein |
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| Protein accession | YP_001276151 |
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| Protein GI | 148655946 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000642179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0141145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTC TAGAAAAGGA TATACCGATA GATATGGACC TCCCGATCAT CATCATTGGC
GGCGGGCTTG GCGGACTATC CGCCGCCATT CACCTGGCAG CGCGCGGTCG GCGCGTGGTT
CTGCTCGAAA AAAACGAACG GGTCGGCGGC AAACTGAACC TGGTCGAGGC GGATGGATTT
CTGTTCGATA CCGGTCCCTC GCTGCTGACA ATGCCCTGGG TGTTACGGTC GGTCTTTACT
GCCGCAGGGC GACGCATGGA GGAAGCGCTG ACCATTACGC AACTCGAACC CATCTGCCGG
TACCGCTGGC CCGACGGTGC ACGGTTCGAC GCTCACCAGA ATCTGCCACG CCTCATCGAG
GAAATCGAAC GGATCGAACC GGCGGATGTT TCGGGGTTTC TCCGCTTTCT TGCCTACGCT
GAACGGATTT ATCGGGCGGC GGAAGGACCA TTTTTGCTCC GACCCTTCGA CGGGATCCGA
AGTCTGCTCA CGCCTGAACT CTTCACCGGA ACGTTGCAGA TCGACCCCTT CCGCACGGTC
GATCAGGCAG TCAGCAGTTT TTTCCGCAGC CGGTATCTGC GCCAGGTATT CAATCGCTAT
GCATCGTATA ATGGATCATC GCCATTTCGC GCACCGGCAA CGTTCAACCT CATTCCTTAT
GTCGAGTTTG CTCAGGGTGC GTGGCATGTT TCTGGCGGAA TGTATCAGAT CGCACGCGCA
CTCGAACAAC TGGCGCGTGA ACTGGGGGTC GAAATCCGCG CCTGCACACC TGTCGAACAC
ATCGAGGTCA GCAACAATGC CGCAACCGGC GTCATCCTGG CTGGCGGTGA GCGACTTGCT
GCCTCCCGGG TGATTGTCAA TGCCGACCCA CGCTACGCAT ATGCAACGTT GTTGCCCGGA
CATGAAAAAA CCGCCGCACG CCTTGCACAG CTGGAACTAT CGTACAGCGG ATTCGTGCTA
TTGCTGGGGA TCAATCGCAT CTACCCCGAC CTGGCGCACC ACAATATCTT TTTCTCTTCC
GACTATCGCG CCGAATTTGC CGCCATCGTC GATATGCAGG TTCCCGCACC CGATCCAACA
ATCTACGTTT GCGCAGCATC AGTAACCGAT CCGCGCCTGG CGCCTCCCGG TCATATGAAC
CTGTTCGTTC TGGTCAACGC CCCGGTGCTC AATCCGCGGG TCAACTGGGC ACGCGAAGCG
CAGGGGTATC GCAATCTGAT CCTGCACAAA CTCGAGCGCA TGGGACTGGA GAACCTGAGC
CAGCATATCG TCATCGAGCA GATCTGGACG CCAGAAACGA TCAATCAACG CTACAACGCG
CCGGGGGGAT CGATCTATGG ACTGGCATCG AACAATCCGT GGACAGCATT CATGCGTCCG
CCGCTGCGCG CCCGTGACGT GCGCGGCGTC TACTTCGTCG GCGGCGGGAC CCATCCCGGC
GGCGGCATTC CACTGGTACT ACTTTCCGGG CGCGCCGTCG CCGAGCGTGT CATGGCGGAT
TCCGCCTGA
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| Protein sequence | MTILEKDIPI DMDLPIIIIG GGLGGLSAAI HLAARGRRVV LLEKNERVGG KLNLVEADGF
LFDTGPSLLT MPWVLRSVFT AAGRRMEEAL TITQLEPICR YRWPDGARFD AHQNLPRLIE
EIERIEPADV SGFLRFLAYA ERIYRAAEGP FLLRPFDGIR SLLTPELFTG TLQIDPFRTV
DQAVSSFFRS RYLRQVFNRY ASYNGSSPFR APATFNLIPY VEFAQGAWHV SGGMYQIARA
LEQLARELGV EIRACTPVEH IEVSNNAATG VILAGGERLA ASRVIVNADP RYAYATLLPG
HEKTAARLAQ LELSYSGFVL LLGINRIYPD LAHHNIFFSS DYRAEFAAIV DMQVPAPDPT
IYVCAASVTD PRLAPPGHMN LFVLVNAPVL NPRVNWAREA QGYRNLILHK LERMGLENLS
QHIVIEQIWT PETINQRYNA PGGSIYGLAS NNPWTAFMRP PLRARDVRGV YFVGGGTHPG
GGIPLVLLSG RAVAERVMAD SA
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