| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1807 |
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| Symbol | |
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| ID | 5208766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2231840 |
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| End bp | 2232589 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640595415 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001276147 |
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| Protein GI | 148655942 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0254407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCA CCGATCAGGT TGCAATTGTT GTTGGCGGAT CGGGAGCGAT TGGCGCAGCG
GTAGCGGCGA TGCTCGCCGA ACGTGGCGCG CTGGTCGTTG CCGGATACTG CCGGAATGCT
GCTGCGGCAG CGAATGTCGT TGCCAGATGC CGCGGGATGC GTGGCAGCGT TGTGGCGCGC
CAGGTCGATG CCCGCGATCC GCAGTCGGTT GATGCACTGG TCGATACCGT CGCCGGGGAG
CACGGGCGTC TGGATATTGT CGTGTTCTGC GCTGGCGCAA TGCGCCTGAT GCCGGTCGAA
ACGCTCGGCA TCGCGCAGTG GAACGAGACG CTGATGCTGC ATCTCGACGG CGCATACCAT
GTGTGCCGTG CGGCGTTGCG TCGCATGATG CGGCGGCGCT ACGGGCGGAT CGTCAATGTT
GCGGCGCTCC ACGGGTTGGC AGGCGGTCCG CACCAGGCGG ATTTTTCTGC GGCAACCGGC
GGAATGCTGG GGTTGACGCG CACGCTGGCG CGGGAAGCGG CGCCCTGGAA CATCACCGTC
AACGCGGTCG CGCCTGGTCT GATCGAGACG CCGCAACTGG CGACAATCCC GGAGGAGATG
CGCGCCTGGG GGGAGCGGGT CATTGCGTTG CGCCGCGTCG GGAAGCCAGA GGAAGTGGCG
GCGGCGATCG TCTTCCTGGC ATCGCCGCTT GCGTCGTACA TTACCGGGCA GACACTTGTG
GTCGATGGTG GATGGCGGAT GGCGCCGTAA
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| Protein sequence | MDFTDQVAIV VGGSGAIGAA VAAMLAERGA LVVAGYCRNA AAAANVVARC RGMRGSVVAR
QVDARDPQSV DALVDTVAGE HGRLDIVVFC AGAMRLMPVE TLGIAQWNET LMLHLDGAYH
VCRAALRRMM RRRYGRIVNV AALHGLAGGP HQADFSAATG GMLGLTRTLA REAAPWNITV
NAVAPGLIET PQLATIPEEM RAWGERVIAL RRVGKPEEVA AAIVFLASPL ASYITGQTLV
VDGGWRMAP
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