| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1802 |
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| Symbol | |
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| ID | 5208761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2226014 |
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| End bp | 2226664 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640595410 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001276142 |
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| Protein GI | 148655937 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.728657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0341375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTCG TTCAGGATCT GCTGACGACC TTCAATTTCA TCGTTCAGGG ATTGTGGGTG
ACCATCAGCG TTACAGCGGT TGCACTGACA ACAGGCGTCG TGATCGGCAT CGTTCTGGCA
ATCGCGCGCG TCTACGGTCA CCCCTCTCTC CAGGTCGCCG TCACCGTCTA TAGCGTGGTC
ATCCGCGCTG TTCCGGTCAT CGTTATTATT TTCATTCTGT TCTTTGTCAT CTCCCGTTAC
GTCAATCTGT CGCCATTCTG GGCAGGTGCG CTGGCGTTGG GGTTTGCGTC CGGGGCGTAT
CAAACGGAAA TTTTTCGTGG CGCCCTTCAA GCGGTGCAAC CCGGACAGAT GATTGCCGCA
CGCGCAATTG GCATGAGCCG ACTCCAGGCG ATCCAGAGCG TTGTCCTGCC GCAGGCGCTG
CGGCTGGCGC TGCCAGCCTG GGGAAATGAG GCAACGCTGG TGCTCAAAGA CTCGACGCTG
GTGTTCGCCG TGGGTGTGCC GGAAATTCTG CGCCGCGCAC AACAGGTCAG CGCACGCACC
TTCGAGCCAT TCCTCGCCTT TGGCGTTGCG TTGCTGCTCT ACCTGGCGTT GACGATGATC
ACCACCCAGG CGCTGCGATG GCTCGAACGC CGGTATCGGC TACAGATGTG A
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| Protein sequence | MEFVQDLLTT FNFIVQGLWV TISVTAVALT TGVVIGIVLA IARVYGHPSL QVAVTVYSVV
IRAVPVIVII FILFFVISRY VNLSPFWAGA LALGFASGAY QTEIFRGALQ AVQPGQMIAA
RAIGMSRLQA IQSVVLPQAL RLALPAWGNE ATLVLKDSTL VFAVGVPEIL RRAQQVSART
FEPFLAFGVA LLLYLALTMI TTQALRWLER RYRLQM
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