| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1800 |
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| Symbol | |
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| ID | 5208759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2224525 |
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| End bp | 2225199 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640595408 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001276140 |
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| Protein GI | 148655935 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.99477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0316116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATA TTATCGATCT CCTGGGAAAA GTAACGCCCG ACCTGTTGCA GGGCACCGTT
GTCACACTCC AGATTGCGGC GGTCTCGCTG ACGCTGGGGA TGATCATCGG GTTGCCGGTC
GGCGTTGGGC GGGTGTACGG ACCGGGGTGG GTCCAGCGCA TTCTTGGCGC ATATGTGACC
CTTTTTCAGG GAACGCCGCT GCTGATCCAG TTGTTCATGG CGTACTATGG TCTTCCCGAT
ATCGGGATCA CGCTGGGACG CCTGCAGGCG GCTTTTCTCA CGCTGGGTCT CAACAGTGCC
GCATATCAGG CGGAGTACCT GCGCAGCGCA TTGCAGTCGG TCAGCGAAGG ACAGATGACC
GCTGCACGAG CGCTCGGTAT GAGCAAATGG CAGGCGATCT GGAGCATCAT TCTGCCGCAG
GCGGTGCGCC TGGCGTTGCC TGCCTGGTCG AACGAAGCGG TTGCCATGCT GAAGTATACG
TCGGTGGTGT TTCTGATCGC CGTTCCTGAC CTCATGGGTC AGGCGAAGAT TCTGTCGAGT
CGCTACTTCG CTCCGATCCA GATTTACCTG ATTGTGGCGG TGTTCTACAT TGTGCTTGTC
GGAATCACCT ATCTGATCCT GACCTGGATC GAACGTCGGG TGCGCATTCC TGGATTGACC
GGCGGAACGG AATAA
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| Protein sequence | MNDIIDLLGK VTPDLLQGTV VTLQIAAVSL TLGMIIGLPV GVGRVYGPGW VQRILGAYVT
LFQGTPLLIQ LFMAYYGLPD IGITLGRLQA AFLTLGLNSA AYQAEYLRSA LQSVSEGQMT
AARALGMSKW QAIWSIILPQ AVRLALPAWS NEAVAMLKYT SVVFLIAVPD LMGQAKILSS
RYFAPIQIYL IVAVFYIVLV GITYLILTWI ERRVRIPGLT GGTE
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