Gene RoseRS_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1781 
Symbol 
ID5208740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2198419 
End bp2199144 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID640595389 
ProductFHA domain-containing protein 
Protein accessionYP_001276121 
Protein GI148655916 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00206586 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.033181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAC TCAGCCGTTT TGAAGCCTTT ATGGAAAATA TCGTCGAAGG GTCGGTTGCG 
CGGTTATTCC GCAGCCCGGT TCAGCCTGCC GAGATCGCCA AACGTCTCGA ACGCGCCATG
GAATCCAACC AGACGGTCAG CGTGCGGCGT ATTCTGGTGC CCAACTACTA CCGCGCATTC
CTGAATCCAC AGGATTTCGA GACCTTCAAG CCGATCCGCG CCGACGTGGA GCGCGAGATG
GCGACCTATC TGGCGGAACT GGCGCAGGAG CGCGGGTTCA GCATGGTCGA GCATCCGCGC
GTCGAACTGG TCGCCGATGC CGGTGTGCCG CGCCGGACAA TCCAGGTCGT GGCGGAAACG
CAGGCTGCGC CGGCGGTAAG CCAGTCCGGT GATACCCAGG TCATCCCGGC GCAGGCGGCG
GCAGCGCCAG CAGCACGGGC GCGCCTCCTG TTGACGACAT CCAGCGGTAC GCACGTTATC
CCCCTCGACA GCACGCTGAT GACGATTGGA CGCGGGCTGA ACAACGATAT TATCCTGGAA
GATTCGCGCG TCTCCCGTAA CCATGCCCAA CTCCGCTATC GATCTCGCCG CTTCTGGCTG
ACCGACCTCG GCTCGACCAA TGGCACCTTC GTCAACGGCG AGCCGGTGAC TGAACGCGCA
TTGCGTGATG GCGATGTTGT GTCACTCGGC GGACTGGAGT TGACGTTCCG GCAGACCGAC
CGTTGA
 
Protein sequence
MSALSRFEAF MENIVEGSVA RLFRSPVQPA EIAKRLERAM ESNQTVSVRR ILVPNYYRAF 
LNPQDFETFK PIRADVEREM ATYLAELAQE RGFSMVEHPR VELVADAGVP RRTIQVVAET
QAAPAVSQSG DTQVIPAQAA AAPAARARLL LTTSSGTHVI PLDSTLMTIG RGLNNDIILE
DSRVSRNHAQ LRYRSRRFWL TDLGSTNGTF VNGEPVTERA LRDGDVVSLG GLELTFRQTD
R