Gene RoseRS_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1780 
Symbol 
ID5208739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2197919 
End bp2198383 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content59% 
IMG OID640595388 
ProductFHA domain-containing protein 
Protein accessionYP_001276120 
Protein GI148655915 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000257566 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0327167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACT TCGCCAACGC TTCTCTTGAC GCTGTGATGC TGGTACTGCG CGTTGCCGTG 
GTGCTGCTGC TCTATTTCTT TCTCTGGCAG GCGGTGCGCG TCATGATCCG CGAACTTGCA
GCAATCGGTC AGGCAGGGCT GACTGCCCCG TCATACAACC CGTATGGGCA TCTCGTCGTG
CTGCGCAGCG GGCAGAGCGG CGTCGCGGTC GGCAAGATGT TCCCGCTCAG TCCAAGCACG
ATTATCGGGC GCAGCATGGA ACACTGCGAA ATCGCGTTGA ACGACTCCTT CCTGTCGCAG
CAGCACGCCC GCCTCGAATT GCGCGGCAAT CAGTGGGTGC TGGAAGATCT CAACAGCACC
AATGGCACAT TCGTGAATGA CATAGAGGTG CGCGACGCGA CTGTGGTCGA AGAAGGTGAC
ATCATTCGCG TGGGGCGCAT CGAGTTGCGC CTGGTGAAAG GGTAG
 
Protein sequence
MFDFANASLD AVMLVLRVAV VLLLYFFLWQ AVRVMIRELA AIGQAGLTAP SYNPYGHLVV 
LRSGQSGVAV GKMFPLSPST IIGRSMEHCE IALNDSFLSQ QHARLELRGN QWVLEDLNST
NGTFVNDIEV RDATVVEEGD IIRVGRIELR LVKG