Gene RoseRS_1765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1765 
Symbol 
ID5208722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2181382 
End bp2182116 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content58% 
IMG OID640595371 
ProductMIP family channel protein 
Protein accessionYP_001276105 
Protein GI148655900 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.459656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCAC AAATCCGGTT TTCTGATCGC CCTCTGATCG GGACCATGCT GCTCGTTCTA 
CTTGGCGACG GTGTTGTCGC TAATGTGGTA TTGAGCAAGA CGAAGGGCAA CAGCAGCGGG
TGGATTGTGA TCACCACGGC GTGGGCTTTG GCCGTCTTTG TCGGCGCCTA TTCCGTTGCG
GCGATCAGCG GCGCGCACCT GAATCCGGCA GTGACCATCG GTCTGGTTGT CGCCGGCAAG
TTTGAAGCAG CCATGGCGCC GATGTATATC GGCGCGCAGT TCATCGGTGC GTTTATTGGC
GCTGTGCTTG TCTTCCTGCA CTACTATCCG CACTGGGCGG AAACCAGCGA TCCAGGGTTG
AAACTCGCCG TGTTCAGCAC CGGTCCGGCG GTGCGCAGTG TGGCGTGGAA CCTGGTCAGT
GAGATTATTG GGACGTTCGT TCTGGTCTTC GGTATTCTTG CCATTGATGG ACCGGTCATG
AACAATGGCA GCTTCGGCGC GCTTGGAATT ATTCCGGTGG CCTTTCTGGT GTGGGTGATC
GGTCTGTCGT TAGGCGGTAC GACCGGTTAT GCCATCAATC CTGCACGTGA CCTCGGTCCT
CGTATTGCTC ACGCAGTGCT GCCCATCCCC GGCAAGGGGA GCAGCGACTG GGGATATGCC
TGGATACCGG TTGTTGGTCC GATCATCGGC GGCGCCGTCG CGGCAGCGTT GTATGTTGCT
CTGGGGGCTT TCTGA
 
Protein sequence
MIPQIRFSDR PLIGTMLLVL LGDGVVANVV LSKTKGNSSG WIVITTAWAL AVFVGAYSVA 
AISGAHLNPA VTIGLVVAGK FEAAMAPMYI GAQFIGAFIG AVLVFLHYYP HWAETSDPGL
KLAVFSTGPA VRSVAWNLVS EIIGTFVLVF GILAIDGPVM NNGSFGALGI IPVAFLVWVI
GLSLGGTTGY AINPARDLGP RIAHAVLPIP GKGSSDWGYA WIPVVGPIIG GAVAAALYVA
LGAF