Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1754 |
Symbol | |
ID | 5208711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2168183 |
End bp | 2169436 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640595360 |
Product | hypothetical protein |
Protein accession | YP_001276094 |
Protein GI | 148655889 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.467768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCGCA CGCCCACGGA ACGGTTGCTG CAGCAGCAGA TCCAGACCCT CTTCCCGCGC TTGTCGCGTC ACTGGCGCCG CGCCCTGGCC CGCTGGGTCT TGGGCGCCCT CTTGGCGGGG AGCGCCAATC GTCCCGCGCT GGCGCCAGCG CTCGCCACTG CCGGGATCGC CCGTGCCGCC ACCCTGGCGG ACGCCTGGGA CGCCTGGATC GCCGCCCCGG CCCATCTCAT AAACACCGCC GACCCACCTG CGGCGGGTGC GCCACCGGTG GTCAGTCCGC TGGCGTGCGG CGCCGACCTG CTCCGCTGGA TTCGCGCGCA CTGGACCGGC GGACCGCTCG TGCTCGGGCT GGATGCCTCC CATCGGCGCG CTGACGTCGT TCTGCTGCGC ATGAGCGTCC TCTATCGGGG CGCTGCCCTG CCGGTCGCCT GGGTGATCGT CCCGGCGAAC CAACCGGGCG CGTGGGAACC GCCCTGGGAG CGGATGCTGC GCTGGGCCCG CAGCGCGCTG CCGCTCGACC AGGAGGTCCT CACGCTGGCG GATCAGGGGT TGTGGAGCCC CCGGCTGTGG CACGCCATCC GGTCGCAGCA GGTCCATCCC ATCATGCGGG TGCGTCCCAC GTCGACCTTC GCGCCGACCG GTCAGGTGCG CCAGTCGGTG CTGCGTCTGG CGCCCGGACC GGGGCATGGA TGGGTGGGCG CGGGGGTCGC CTTCACGCAC GCACCCAAGC GGATTGCGGG CACGCTGGCG GTGGCGTGGG GCGCCGGCCA TGCGGAACCG TGGGCGCCGC TCGTCGAGCG TTCAGCCGCG CGGGTGGATG CCGCGTGGTA TGCCCTGCGC AGTTGGGACG AGGCGGGCTT CCGCCAAAGT ACGTCGATGG GCTGGGACTG GCAACGCGGT CAGGTGACGG ACCCGGATGC GGTGGCCTGG CAGTATCTGG TGGTGGCGAC GGTCACGCGG TGGACGGTGG CCGTCGGCAC GCGGATCGAC GATGCAGAAC CGCAGGGGGT TCCGCCCGGT CGCTTGCGGC GGGCGCCGCC GACGACGGGC GCACCGCTGC GCCGTCGCTG GAGCGGCACG GCGCAGCGGG TGATCAGCCT GCTCCGGCGG GGGGCAGGTC GGCGCCTGCG CTGGTTGCTG GCGCAAGGGC GTTGTTGGGT CCGCTTGTGG TTGCGCCCGG AGCCCTTGCC CAAAATAGGT GACAGCGTAA CCATGCATAT CGATGACCCG TCCCAATGCC TGAAATCGCC CTAA
|
Protein sequence | MARTPTERLL QQQIQTLFPR LSRHWRRALA RWVLGALLAG SANRPALAPA LATAGIARAA TLADAWDAWI AAPAHLINTA DPPAAGAPPV VSPLACGADL LRWIRAHWTG GPLVLGLDAS HRRADVVLLR MSVLYRGAAL PVAWVIVPAN QPGAWEPPWE RMLRWARSAL PLDQEVLTLA DQGLWSPRLW HAIRSQQVHP IMRVRPTSTF APTGQVRQSV LRLAPGPGHG WVGAGVAFTH APKRIAGTLA VAWGAGHAEP WAPLVERSAA RVDAAWYALR SWDEAGFRQS TSMGWDWQRG QVTDPDAVAW QYLVVATVTR WTVAVGTRID DAEPQGVPPG RLRRAPPTTG APLRRRWSGT AQRVISLLRR GAGRRLRWLL AQGRCWVRLW LRPEPLPKIG DSVTMHIDDP SQCLKSP
|
| |