Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1741 |
Symbol | |
ID | 5208698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2148601 |
End bp | 2149788 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640595347 |
Product | amidohydrolase |
Protein accession | YP_001276081 |
Protein GI | 148655876 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.452444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACA AAGCTCAAGC CATCGCTCCT GAAATCATTC GTCTGCGTCG TGAAATCCAC GCGCATCCAG AGCTTGCGTT CCAGGAAGTG CGAACCGCGC AACTGGTTGT CGAAACATTG CGCGAAATCG GCGGCATCGA CATTCGTACC GGCGTCGGCA AAACCGGTGT CGTGGGACAA CTCGGTGACG GCAACGGACC GACGATCGGC ATCCGTGCCG ATATGGATGC CCTGCCGATC GATGAGGCGA CCGGTTTGCC GTTTGCTTCC CGGAATCCAG GGGTGATGCA CGCATGTGGT CACGATGCCC ACACCGCGAT CCTGCTCGGC GTGGCGCACC TGCTCCGGCA GGAGTTTGCC GCCGGCAACC TGCACGGCAC CGTGCGCTTC CTTTTTCAGC CAGCCGAAGA AGCGCAGGAC GACGAGGGTC TCAGCGGTGC GCCGCGCATG ATCAACGACG GCGCGCTCGA TGGGGTCGAT CACGTGATTG CCCTGCACGT CGACTCGGGA CTGCCGGTTG GGAAAATCAC CATCCGTGAC GGAGCGAGTT CGGCAGCGGT CGATACCTTT CGCGGGTGGA TCACGGGGAG TGGCGGGCAT GGCGCCTACC CGCACCTGGG CACGGATCCG CTCTGGATGC TGTTGCCGGT GATGCAGGCG TTGCACGGGA TTGTTGCGCG CCGGATCAAC CCGATGCACC CGGCGGTCGT CAGCCTTGGC ATTGTGCGGG GCGGCACAGC GTCGAACGTT CTTCCCGCCG GGGTGTATCT GGAAGGAACA TTGCGCAGTT TCGATCCGCA GGTGCGCGAG CAGTTGATCG TCGAAGTCGA ACGCGCATTC GCGGTTGCAC GCGCCGTAGG CGGCGATTAT CGGCTGGAGA TCGAGCGCGG CTATCCTGCC GGGCACAACG ATGCCACCGT CAGCGAATGG ATCGCCGCCA CGACCGCCGA TCTGATCGGC GCCGATGCAA TCGACCGGAG TCGCAGCGGG ATGGGGGCGG AAGATTTCGC CTATATGACC CAGAAAGCGC CTGGTGCGAT GTTCATGCTC GGCGCTGCGA TTGACGATGG TGTGAATCGC GGACATCACA CCCCGATCTT CGACATCGAT GAGCGCGCGC TGCCGATCGG CGCGGCAATT CTCGCCGAAA CAGCGCGACG CTATCTGGCA GGCGAAGTGA AACGCTAG
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Protein sequence | MLDKAQAIAP EIIRLRREIH AHPELAFQEV RTAQLVVETL REIGGIDIRT GVGKTGVVGQ LGDGNGPTIG IRADMDALPI DEATGLPFAS RNPGVMHACG HDAHTAILLG VAHLLRQEFA AGNLHGTVRF LFQPAEEAQD DEGLSGAPRM INDGALDGVD HVIALHVDSG LPVGKITIRD GASSAAVDTF RGWITGSGGH GAYPHLGTDP LWMLLPVMQA LHGIVARRIN PMHPAVVSLG IVRGGTASNV LPAGVYLEGT LRSFDPQVRE QLIVEVERAF AVARAVGGDY RLEIERGYPA GHNDATVSEW IAATTADLIG ADAIDRSRSG MGAEDFAYMT QKAPGAMFML GAAIDDGVNR GHHTPIFDID ERALPIGAAI LAETARRYLA GEVKR
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