| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1728 |
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| Symbol | |
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| ID | 5208685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2123988 |
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| End bp | 2125040 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640595334 |
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| Product | pyruvate dehydrogenase (acetyl-transferring) |
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| Protein accession | YP_001276068 |
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| Protein GI | 148655863 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.156274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.311431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCACG TTGATGAACA TGGACGCAAC TCTGCTGGCA TCCTCTCGAA CGACTCCGGG
CTTGATGCTG CAACGCTGAT CGACTATTAC CGTCAGATGG TGCTCATCCG TCGCTTCGAA
GAGAAATGCC AGGAGATGTA TACCAGAGCG AAAATTGGCG GGTTCCTCCA CCTGTACATC
GGCGAAGAGG CGACTGCCGT CGGCGCGATT GCCGCTCTGC GACCCGATGA CCATATTTTC
ACCCATTATC GTGATCACGG TCACGCGATT GCGCGCGGAC TCGACATTAA TGCACTGATG
GCGGAACTGT TCGGCAAGGT GACCGGTTGC TCGAAAGGGT TGGGCGGCTC AATGCACTTT
GCCGATGCCA GCAAGAACTT CTGGGGCGGG TATGCGATCG TGGGCAGCCA CCTGCCCCTG
GCGACCGGTG TGGCGCTGGG AATGAAAATG CAGCGTAAAG ACTCGGTCGT GATGGTCTTC
TTTGGCGATG GCGCCACCAA TGGCGGCGAG TTCTACGAGT CGCTCAATTT TGCGCAACTC
TGGAAATTGC CGGTTGTCTT TGTCTGCGAG AATAATCTCT ACGCCATGGG GACGCCGCTG
GAAGTCCATT CGTCGGTCAC CGAAATCTAC CGCAAAGCGT GCGCCTTTGA TATGAAGGCG
GAACGGGTGG ACGGCAACGA TGTGCTGGTG ATGCGCGAAG CCTCCCTGCG CGCGGTTGAG
CATGCGCGTT CCGGCAAAGG ACCGGTGCTG CTCGAAGCGA TGACCTACCG CTTTCGCGGT
CATTCGGCGC AGGATACGCA AAAGTACCGC ACCAAAGAGG ATATCGAACG CCACCGGCGG
AACGATCCGA TTGTGCGGTA TCGCACGCTG CTGCTCAACG AGGGCATTGC CACCGAACAA
CAGATCCGTG ATATTGACCG GATGATCGAC GATCAGGTCG AAGCGGCGGT ACGCTTCGCC
GACGAGAGTC CGGAGCCAGG GCACGAATGG ATTACACAGG CAGGCGTGTA TGCCGCGCCG
ATTGCAGTCG ACCCACCCAT CCATGGAGAA TGA
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| Protein sequence | MAHVDEHGRN SAGILSNDSG LDAATLIDYY RQMVLIRRFE EKCQEMYTRA KIGGFLHLYI
GEEATAVGAI AALRPDDHIF THYRDHGHAI ARGLDINALM AELFGKVTGC SKGLGGSMHF
ADASKNFWGG YAIVGSHLPL ATGVALGMKM QRKDSVVMVF FGDGATNGGE FYESLNFAQL
WKLPVVFVCE NNLYAMGTPL EVHSSVTEIY RKACAFDMKA ERVDGNDVLV MREASLRAVE
HARSGKGPVL LEAMTYRFRG HSAQDTQKYR TKEDIERHRR NDPIVRYRTL LLNEGIATEQ
QIRDIDRMID DQVEAAVRFA DESPEPGHEW ITQAGVYAAP IAVDPPIHGE
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