Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1720 |
Symbol | |
ID | 5208677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2116827 |
End bp | 2117960 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640595326 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001276060 |
Protein GI | 148655855 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.588865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCCA CGAATGTCGC AAGCTCAGCA CCGGCGATCA GGCATGACCA TGCACCAGCG CTCCCGGTCG TCTGGCAATC GCGCTGGGGT CTCCCGATCG GGTATGCTGT CTCATCGGAA GCGCTGGCAC TCGAACTTCT CTCGCGCGGC GTTGAACTGA TGTATCGCCC GACACCCTGG CATATGCCGG GGGTGATCCG CCACCCGGCG CTGCGTGCAG CGGCGGCGCG CACGCCACGC GATGATGCGA TCCAGGTCAG CTACGATCAG GCCGATCTGT TCTTCACTGA ACATCCAGGG TACAAAATCG GATACACCAT GCTGGAAGTC GATGGTCTGC CGCGCGAATG GGTCGCCGCA TGCAACGCGA TGGACGAAAT CTGGACGCCA GGCCGCTGGG GGGCGACAGT GTTTGCCGAT GCTGGCGTCA CACGCCCGAT TGTTGTGATG CCGCTGGGGT ACGATCCGGC GCGTTTTCGT CCCGATGGAC CGGCGCGTCG CATTGCCGGG CGATTCACCT TCCTGTCGAT CTTCGAATGG GGTGAGCGCA AAGCGCCGGA GGTGTTGTTG CGCGCCTATG CAGCAGCGTT CACGCGACGC GATGATGTGC TGCTGGTGTT GCGCGTAAAC AATTTCGATG CAGACGTCGA TGTCGCCCGA CAGATCGCTG CGCTCCGGCT GCCTGCCGAT GCGCCGCCCA TCGTTGTGAT CTACAACCGT CAGATCAGCG ACGATAGCCT GGGATCGCTC TACCGCAGCG CCGACTGTTT CGTGTTGCCG ACTCGTGGTG AGGGATGGGG ATTGCCCATT CTCGAAGCGA TGGCGTGCGG GTTGCCGGTG ATCGCCACCG ACTGGAGCGG CCAGACCGAA TTCTTCCACA GCGGGGTCGG CTACCCATTG CGTGTACGCC GACTGGTCGC CGCCAATGCC AAATGCCCCT ACTATCTGGG ATGGCGCTGG GCAGACCCGG ATGAGGAGCA CCTGATTGCG CTTATGCGCT ATGTCTATGA ACACCCTGGC GAAGCGCGAC AGGTTGGCGC ACGTGCGGCG CAGGAAGCAG CGGCGCGCTG GACGTGGGCG CACGCAGCAG AGCGGATCCA TGCACGGCTG CTGGCAGTGG CAGCACCGGT TTGA
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Protein sequence | MESTNVASSA PAIRHDHAPA LPVVWQSRWG LPIGYAVSSE ALALELLSRG VELMYRPTPW HMPGVIRHPA LRAAAARTPR DDAIQVSYDQ ADLFFTEHPG YKIGYTMLEV DGLPREWVAA CNAMDEIWTP GRWGATVFAD AGVTRPIVVM PLGYDPARFR PDGPARRIAG RFTFLSIFEW GERKAPEVLL RAYAAAFTRR DDVLLVLRVN NFDADVDVAR QIAALRLPAD APPIVVIYNR QISDDSLGSL YRSADCFVLP TRGEGWGLPI LEAMACGLPV IATDWSGQTE FFHSGVGYPL RVRRLVAANA KCPYYLGWRW ADPDEEHLIA LMRYVYEHPG EARQVGARAA QEAAARWTWA HAAERIHARL LAVAAPV
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