| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1716 |
|---|
| Symbol | |
|---|
| ID | 5208673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2110547 |
|---|
| End bp | 2112490 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640595322 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001276056 |
|---|
| Protein GI | 148655851 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3211] Predicted phosphatase |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.649721 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGAC GCGACGAACA GGACAAACTG ATCGTCCGGT CGGTCGATGG CAAGGGTGAG
CACTTCGAAG ACATTCTGGA ACAGCATCTG AGCCGCCGTT CTTTCCTCAA GACTGCCGCG
GTTACTTCAG GGCTGGTAGT CGCCGCCACA GCGATGGGCG TTGATGTTGC TACAGCGCAA
ACGCGCCCGG CGCCGATGCT GCCAAAGTTC CGCAAAGTTT CGCCAACCGC ACCAGAAGTA
GATGAGATTG CCGTACCAGA CGGGTACTAT GCAGCAACGC TCATCCGCTG GGGTGAGCCG
ATCTTCGCCG ATGCGCCGGA GTTCGACGTC TGGACGCAGA CGAAGGAAAA GCAGGAGAAG
CAGTTCGGCT ACAACTGCGA CTATATCGGC TATTTCCCGT TGCCGTCGTA CACCTCGAAC
AATTCGACGC GCGGTTTGCT GGTCGTCAAC CACGAATATA CCAACCCCGA ACTGATGTTC
CCCGGCTACG ATGTCGAGAA CCCCAACCCT ACGAAGACGC AGGTCGATGT CGAACTGGCA
GCGCATGGCG TAACGGTTAT CGAAGTCGCG CGCGGTCGCG ATGGTCGCTG GAATGTAGTG
CGCAATTCGC CCTATAACCG CCGACTGACT GGCTACACGC CGATGACCAT CAGCGGTCCG
GCAGCCGACC ATGAATGGAT GAAGACGAGT GCTGACCCGA CGGGGCGCAA CATTCTCGGC
ACGCTGAATA ACTGCGCTGG CGGCAAGACG CCGTGGGGCA CAGTGCTGAC CGCCGAGGAG
AACTTCCACC AGTATTTCGC CAACCTGCGC GGGTTGCGGG ATGGCGACTA TCGCAAGGCG
ATCCACGCAC GCTACGGGAT GCCGACTGGC GCATCCGAGC GCAGGTGGGA GAACTTCTAT
GATCGCTTCG ATGTCGCCAA AGAACCGAAT GAAGGGTTCC GCTTCGGCTG GATCGTCGAG
TTCGACCCCT ACAATCCTAA ATCAGTGCCG GTGAAGCGCA CCTGGCTGGG GCGCTTCCGC
CACGAGGCGG CGACGATTGT GATCGCGCCC AGCGGTCAGG TTGTGGCGTA CTCCGGCGAC
GATGCACGCG GCGAGTATGT CTACAAGTTC GTCTCGAACG GGCGCTACAA CCCGCGCAAC
CGTGAGGCGA ACTTCAACCT CCTCGACGAT GGCATGCTGT ACGTTGCGCG CTTCAACGCG
GACGGCACCG GCGAGTGGCT GCCGCTGAAG CACGGCTTCG GTCCGCTGAA CGAGGGCAAC
GGTTTCATGT CGCAGGGAGA CGTGCTGATC AAGACGCGCA ACGCTGCCGA CGCGCTTGGC
GCAACCAAGA TGGACCGGCC GGAGGACATC GAAACCAACC CGGTCAACAA GAAGGTCTAC
ATCATCCTGA CGAACAACAG CCAGCGCGGC GTCGGCAGCG GTCCGCCGGT CGATGCTGCC
AACCCGCGCG CGAACAACCG CGCTGGTCAC ATTATCGAAC TGACCGAGGA AGGGAACAAC
CACGCAGCAA CTCGCTTCAC CTGGAACATC TTCATCCTGG CAGGTTTGCC GACCGACGAG
TCGACCTACT TCGCCGGGTA CGACAAGAGC AAGGTCAGCC CTATCGCCAC GCCGGACAAC
ATTGTCTTCG ACCTTGCTGG CAACGCCTGG GTCGCTACCG ACGGCGCCCC CAGCGCGATC
AAACTGAACG ATGGTCTGTT CGCCATTCCG GTCGCCGGTT CGGAGCGCGG CCACGTCCAA
CAATTTTTCT CGTCGGTGGC GGGAAGCGAG GTGTGCGGTC CGGAGTTCAC GCCCGATAAC
CGCACGCTGT TCCTGGCAAT CCAGCATCCG GGCGAGGGTG GCACATTCGA GAAGCCGATC
AGCACCTGGC CCGACCGTCA GGGTCTGCCG CGCCCAAGCG TGATCACCAT TCAGGCGTTC
GACAACCGCC GCATTGGTCA GTAG
|
|---|
| Protein sequence | MGGRDEQDKL IVRSVDGKGE HFEDILEQHL SRRSFLKTAA VTSGLVVAAT AMGVDVATAQ
TRPAPMLPKF RKVSPTAPEV DEIAVPDGYY AATLIRWGEP IFADAPEFDV WTQTKEKQEK
QFGYNCDYIG YFPLPSYTSN NSTRGLLVVN HEYTNPELMF PGYDVENPNP TKTQVDVELA
AHGVTVIEVA RGRDGRWNVV RNSPYNRRLT GYTPMTISGP AADHEWMKTS ADPTGRNILG
TLNNCAGGKT PWGTVLTAEE NFHQYFANLR GLRDGDYRKA IHARYGMPTG ASERRWENFY
DRFDVAKEPN EGFRFGWIVE FDPYNPKSVP VKRTWLGRFR HEAATIVIAP SGQVVAYSGD
DARGEYVYKF VSNGRYNPRN REANFNLLDD GMLYVARFNA DGTGEWLPLK HGFGPLNEGN
GFMSQGDVLI KTRNAADALG ATKMDRPEDI ETNPVNKKVY IILTNNSQRG VGSGPPVDAA
NPRANNRAGH IIELTEEGNN HAATRFTWNI FILAGLPTDE STYFAGYDKS KVSPIATPDN
IVFDLAGNAW VATDGAPSAI KLNDGLFAIP VAGSERGHVQ QFFSSVAGSE VCGPEFTPDN
RTLFLAIQHP GEGGTFEKPI STWPDRQGLP RPSVITIQAF DNRRIGQ
|
|---|
| |