Gene RoseRS_1715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1715 
Symbol 
ID5208672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2109790 
End bp2110383 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content59% 
IMG OID640595321 
ProductHNH endonuclease 
Protein accessionYP_001276055 
Protein GI148655850 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.513097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATACG CGCTCGAGCG TAGGGTCATT CCCCCTTCGC CAGAGCGCAG TGAGTTGGCT 
TTGCAGCTTC TGGAAAGGGG GAAAGGCTTG GGGCAACGAG TTCTTGTTCT CAACGCAAGC
TACGAGCCGC TACAGTTTAT TTCTGTTCGT CGCGCGATCG TTCTCTTGCT GCAGGATAAA
GCAGAGCTGG TCGAAGCTGC CCAGCAGCGT CTTCGCGCGC GCGGCATCTC CCTCGAAGTT
CCGCTGGTTA TCAGGCTGGT GCGATATATC CGCATCCCTC GTCGCATGCG TCTCCCCTGT
TCACGGCGCA GTATCCTGCT GCGCGACCGG GAGACGTGTC AGTACTGCGG TGCGCAGCCT
GGTCGCGCTC ACCTGACGGT CGACCACGTG GTGCCGCGTT CCCGTGGCGG TGAGACAACC
TGGGAAAATG TGGTGACTGC CTGTCGCGAC TGCAATCACC GCAAAGGTGG GCGCACGCCG
GAAGAAGCCG GCATGACCCT GCTGACCATT CCTCGCCAGC CGCAGTATGT CGCTTTTGCG
CTCCTTGGTG AACTCGAACG CCACGATGTG TGGCGAAAAT ACGCATATAC ATAA
 
Protein sequence
MSYALERRVI PPSPERSELA LQLLERGKGL GQRVLVLNAS YEPLQFISVR RAIVLLLQDK 
AELVEAAQQR LRARGISLEV PLVIRLVRYI RIPRRMRLPC SRRSILLRDR ETCQYCGAQP
GRAHLTVDHV VPRSRGGETT WENVVTACRD CNHRKGGRTP EEAGMTLLTI PRQPQYVAFA
LLGELERHDV WRKYAYT