Gene RoseRS_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1713 
Symbol 
ID5208670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2107210 
End bp2107881 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID640595319 
Producthypothetical protein 
Protein accessionYP_001276053 
Protein GI148655848 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.538373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAC TGCAACTGGC GATACCGTAT CTCGAAAGCG GCGACCGGCT CACGCGGGCG 
GAGTTCGAGC GACGCTACAA CGCTATGCCG GATGGCTTCA AAGCCGAACT GATCGAAGGA
GTTGTCTCCG TGGCTTCCCC CGTTCGCTTC GCAACTCACA GCGAACCGCA CAGTCGGATT
ATCACGCTCC TTGGCGTCTA TGCAGCGGCA ACTCCCGGCG TCCGTGTCGG CAATAACGCA
ACCGTGCGGC TCGACTGGGA GAATGAACTC CAACCTGACG GGCTGTTGCG CCTCGAAAAC
GGCACATCAA CCATCGACGC CGATGGCTAC GTTTGCGGAC CGCTGGAGTT CGTCGCTGAA
ATTGCTGGAA GTAGCGCTGC GCAGGACATG CACGCCAAAC TGCGCGTCTA CCGTCGCGCC
GGCGTGCAGG AATATCTGGT GTGGCTGGTC TTCGAGGAGC GCATTGTCTG GTTCACACTC
GACGAAGGCG AGTACCGTCA GATACCCGCC GACCCCGACC ATATCACGCG CAGCCGCATC
TTTCCCGGTC TCTGGTTCGA CCTGCCCGCG CTTCTGCGCG GCGATATGGC AACCGCACTT
GCGGCGCTGC AGCAGGGGAT CGCCGCTGCC GACCACGCCG CTTTTGTCAT CCGCCTGCGA
TCCGGTGAGT GA
 
Protein sequence
MTTLQLAIPY LESGDRLTRA EFERRYNAMP DGFKAELIEG VVSVASPVRF ATHSEPHSRI 
ITLLGVYAAA TPGVRVGNNA TVRLDWENEL QPDGLLRLEN GTSTIDADGY VCGPLEFVAE
IAGSSAAQDM HAKLRVYRRA GVQEYLVWLV FEERIVWFTL DEGEYRQIPA DPDHITRSRI
FPGLWFDLPA LLRGDMATAL AALQQGIAAA DHAAFVIRLR SGE