Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1713 |
Symbol | |
ID | 5208670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2107210 |
End bp | 2107881 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595319 |
Product | hypothetical protein |
Protein accession | YP_001276053 |
Protein GI | 148655848 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.538373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAC TGCAACTGGC GATACCGTAT CTCGAAAGCG GCGACCGGCT CACGCGGGCG GAGTTCGAGC GACGCTACAA CGCTATGCCG GATGGCTTCA AAGCCGAACT GATCGAAGGA GTTGTCTCCG TGGCTTCCCC CGTTCGCTTC GCAACTCACA GCGAACCGCA CAGTCGGATT ATCACGCTCC TTGGCGTCTA TGCAGCGGCA ACTCCCGGCG TCCGTGTCGG CAATAACGCA ACCGTGCGGC TCGACTGGGA GAATGAACTC CAACCTGACG GGCTGTTGCG CCTCGAAAAC GGCACATCAA CCATCGACGC CGATGGCTAC GTTTGCGGAC CGCTGGAGTT CGTCGCTGAA ATTGCTGGAA GTAGCGCTGC GCAGGACATG CACGCCAAAC TGCGCGTCTA CCGTCGCGCC GGCGTGCAGG AATATCTGGT GTGGCTGGTC TTCGAGGAGC GCATTGTCTG GTTCACACTC GACGAAGGCG AGTACCGTCA GATACCCGCC GACCCCGACC ATATCACGCG CAGCCGCATC TTTCCCGGTC TCTGGTTCGA CCTGCCCGCG CTTCTGCGCG GCGATATGGC AACCGCACTT GCGGCGCTGC AGCAGGGGAT CGCCGCTGCC GACCACGCCG CTTTTGTCAT CCGCCTGCGA TCCGGTGAGT GA
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Protein sequence | MTTLQLAIPY LESGDRLTRA EFERRYNAMP DGFKAELIEG VVSVASPVRF ATHSEPHSRI ITLLGVYAAA TPGVRVGNNA TVRLDWENEL QPDGLLRLEN GTSTIDADGY VCGPLEFVAE IAGSSAAQDM HAKLRVYRRA GVQEYLVWLV FEERIVWFTL DEGEYRQIPA DPDHITRSRI FPGLWFDLPA LLRGDMATAL AALQQGIAAA DHAAFVIRLR SGE
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