Gene RoseRS_1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1706 
Symbol 
ID5208663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2101510 
End bp2101902 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content64% 
IMG OID640595312 
Productmethylglyoxal synthase 
Protein accessionYP_001276046 
Protein GI148655841 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1803] Methylglyoxal synthase 
TIGRFAM ID[TIGR00160] methylglyoxal synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGAC GACGACCAAC GCTGGCGCTG ATTGCGCATG ACCGCAAAAA GGACGACATC 
GTGCTCTTTA CGTTACGCCA CCGCGATGCG CTTGCCGGGT GTCGCCTGAT CGCCACCGGA
ACGACCGGGG AGCGAATCGC GCGAGCGACG CGCCTGGAGG TCGAACGAAT GCTGTCGGGA
CCGATGGGTG GCGATGCGCA GATCGCAGCG CGGGTTGCCC AGGGTGAGAT CGATGGGGTC
ATTTTCCTGG TCGACCCGCT CTACGCCCAT CCGCACGAGC CGGATATTCA GGGGTTGCTG
CGGGTGTGCA ATCTCTACAA TGTGCCGCTG GCCACCAACC TGGCGACCGC CGAACTGGTG
ATTGCCGGTC TGCCGCAGGG AGAGGCGGTG TAG
 
Protein sequence
MIGRRPTLAL IAHDRKKDDI VLFTLRHRDA LAGCRLIATG TTGERIARAT RLEVERMLSG 
PMGGDAQIAA RVAQGEIDGV IFLVDPLYAH PHEPDIQGLL RVCNLYNVPL ATNLATAELV
IAGLPQGEAV