| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1653 |
|---|
| Symbol | |
|---|
| ID | 5208610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2029048 |
|---|
| End bp | 2029872 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640595261 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001275995 |
|---|
| Protein GI | 148655790 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0132867 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGATC GCATAGTGCT GCGTCGTCAG CGTCAATCGA TCCATCATCG CTCCATGCGT
TCCGACCTTT CGCCGGACAG TTCCCTGCTC TTCGCATCAG GGAACGCGCT GCGCGGTCAT
ACCTTCAACG CGATCGCCAT CCACCATCAC GCGCCGTTGG GTGCGCCTCA AACCAGGCTG
ACTGTCAACA CGCCAGGCGA TGCGTACGAG CAGGAGGCTG ATCGTGTCGC AACGCAGGTG
CTGCGGATGA GCGACGAGGA GGTGCTGACG GCGCGCGCCG GTGAGGGCAT TCAGCGCCTG
ACGTCGGAGG AAGAGGAAGA GGAGTTGCTC CAGGCGAAGG AAGAGTCGGG CGCCACGCCG
CAGGTGCTGG CGGCGCGCGC CGGTGAGGGC ATTCAGCGCC TGACGTCGGA GGAAGAGGAA
GAGGAGTTGC TCCAGGCGAA GGAAGAGTCG GGCGCCACGC CGCAGGTGAC TCCCGAAACC
CAGGCAGCGA TTGACGCCAT GCGCGGTGGC GGCGCTCCGC TCGATCCGAC GACGCGCACG
TTTATGGAAC CACGCTTCGG GCACGATTTC AGCCAGGTGC GGGTGCATAC CGATGCGCGC
GCCGCAACCG TCGCGCGGTC GCTCGACGCA CTGGCGTTCA CCGTCGGCAA CGATATCGCC
TTTGCGCCAG GGCAGTACCG ACCGGGCAGC GACGAAGGGC GGGCGCTGCT GGCGCACGAG
TTGACCCATA CCCTTCAGCA GACCGGCGGC GCGGCACGGG TGCAGCGGCA GGAAGCGGGA
GCGGAACGTG CGGCATCGTC CGACAATGCG ACATTGAAGC GCTGA
|
|---|
| Protein sequence | MNDRIVLRRQ RQSIHHRSMR SDLSPDSSLL FASGNALRGH TFNAIAIHHH APLGAPQTRL
TVNTPGDAYE QEADRVATQV LRMSDEEVLT ARAGEGIQRL TSEEEEEELL QAKEESGATP
QVLAARAGEG IQRLTSEEEE EELLQAKEES GATPQVTPET QAAIDAMRGG GAPLDPTTRT
FMEPRFGHDF SQVRVHTDAR AATVARSLDA LAFTVGNDIA FAPGQYRPGS DEGRALLAHE
LTHTLQQTGG AARVQRQEAG AERAASSDNA TLKR
|
|---|
| |