| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1649 |
|---|
| Symbol | |
|---|
| ID | 5208606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2022573 |
|---|
| End bp | 2024141 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640595257 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001275991 |
|---|
| Protein GI | 148655786 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.6355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.566503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGT CCAACGACCA TTCCGACCGT CAACGTGATG ACATGATCAC CCTGCGGGTT
CCGCGTGGCG CACTGACCGC GCTCTGGACG CTGGGTTCAC TGATCGCGCT GTTGCTGGTC
GCGCTGGCTT TCATAGCGGG ACTGGCGCTT CGTCCGGCTC TGCCAGCCGC CGCGCCGGTT
CAGGTGCCCG TCATTGTCGA TCCTGCGCCG GTTGCGCCAT CGATTGTGAC ACTGAGTGCA
TCACCTTTGC CGCTCCCTGT CACCCCTGCG CCCCCAACCA GTGCGCCAAC GAGTGAACCT
GCCGTTCAAC CAACGCTCGA ACTCATCCGC CCAACCGAAG CGCCTGCGAT CCCTGCGCCA
ACCGATGCAG CGCCGGTGAT ACCCGCGCCA ACCGGGGTAG ACGCCGATCC TCCAGCGGCG
GTCGATTTTC GCATTGAACC CCAACCGGCA GCAGTGCAAC CGCCAGCCGC ACCGGTTCAG
GCAGCGGCGC AACCGCCGCC AGCCGCGCGA CCCGCCGACT CAGGCGGCGG AGGTGCATCC
CGCCCCGCTC CAACCACGCG CCCGCCTGTG CATGCCCTTC GGGGCAATGT GCGCTGGTTA
ACCGCCAACA GCCCGGTCAT CATCCAGAAC GATCTGCTGG TGAGCAGCGG CGCATCCCTC
ATTATTGAGC CGGGCGTCGA GGTGCAGATC GGGAAAGGGG CATCGCTGGT CATTGATGGA
TCGATCGTGG CGCTGGCAAC GCCAGATCGA CCGGTGCGCT TTACGCAGAT TGGCGGCGGC
GATGATCCGC GGTTGCGCTG GGAAAGTATT ATCGGTCGGG CGGGCAGCGT CATCGATCTG
CGCAATGTTC TCATCACCGG CGGAGGCGGG GGCGGTACGG TGCTGGCCAT GCAGTCGGGG
CGTCTGTCGC TCCAGAGCGC GCGGATCGTC AATAATGGCG GGCACATTCG CGTTGAGGAC
AGTTTCGTCA TCATCCGCGA CAGCGAAATA TCCGGCAACC GGATGCCTTA CGGCTCGGCA
ATCGACATTA CGCTGACGCG TGGCGGCGGC GGTAGTCCCG GCAGCGATGT CGTGATTATC
AACAATCGCA TCCTGAACAA CGCGCTGGTG GCAGGAACCG CGCCGCTGCG CGTCACGAAC
CTGAGTTTCG AGCGTCCGGC GCGGATCGAA ATCGAGCAGA ACCTGCTGGT TGGCGCTGCG
GGACCCAATC TGGCACTGTT CACCAATGCC CAGCTTATGG GGAATATTCG CTGCAATACG
CTGATCGGCG GCGCTAACGG GCTGAGTCTG CGCAGCGACG CCCCGCCCAA CCTCAGCCCG
ATGCTCAACA TCCGCGACAA TGCCATCGAA GCCCACGAGC CGCCCAACAA CCCGTTCTAT
CGCCAGTTCA ACATCGGCAA GGGGGCTACC AGCGACCTGC CGCTCACGAT GACCAACAAC
TGGTGGGAAG TCGCCAATGG TCCCTACGAG CCAGCGTTGA ATCCAGAGGG GCGCGGTGAA
GCGGCAGGAC CGAACATCGC CTTTCAACCA TGGTTGCAGA CACGTCCGGC GTGTGCTCCG
TCCTTCTGA
|
|---|
| Protein sequence | MSTSNDHSDR QRDDMITLRV PRGALTALWT LGSLIALLLV ALAFIAGLAL RPALPAAAPV
QVPVIVDPAP VAPSIVTLSA SPLPLPVTPA PPTSAPTSEP AVQPTLELIR PTEAPAIPAP
TDAAPVIPAP TGVDADPPAA VDFRIEPQPA AVQPPAAPVQ AAAQPPPAAR PADSGGGGAS
RPAPTTRPPV HALRGNVRWL TANSPVIIQN DLLVSSGASL IIEPGVEVQI GKGASLVIDG
SIVALATPDR PVRFTQIGGG DDPRLRWESI IGRAGSVIDL RNVLITGGGG GGTVLAMQSG
RLSLQSARIV NNGGHIRVED SFVIIRDSEI SGNRMPYGSA IDITLTRGGG GSPGSDVVII
NNRILNNALV AGTAPLRVTN LSFERPARIE IEQNLLVGAA GPNLALFTNA QLMGNIRCNT
LIGGANGLSL RSDAPPNLSP MLNIRDNAIE AHEPPNNPFY RQFNIGKGAT SDLPLTMTNN
WWEVANGPYE PALNPEGRGE AAGPNIAFQP WLQTRPACAP SF
|
|---|
| |