Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1641 |
Symbol | |
ID | 5208596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2014894 |
End bp | 2016012 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640595247 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_001275983 |
Protein GI | 148655778 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGCCG GACGCGCTAT GAACCAAGGG ATAGCAGTTG ATCTGCGCAA TGTCGTCAAG CGATTCGCAG ATGTCTGCGC CGTCGATCAC GTCTCCATGC AGATCCGCGA CGGTGAATTC TTCTCGATGC TCGGTCCCTC CGGTTGCGGC AAAACCACTA CCCTGCGGAT GATTGCCGGT TTCGAGTTTC CCACGTCGGG CGATATCCTG CTCCACGGCA GATCGGTCGG AACCACGCCA CCCTTCCGGC GCAATGTGAA TACCGTCTTT CAGTCGTATG CGCTGTTTCC GCATATGACG GTGGCGGAGA ATGTCGCCTT CGGTTTGCGC ATGAAGAAGG TTCCGCAATC CGAAATTGCG CGGCGGGTGA CCGAGGCGCT CGATATGGTG CGCCTGGGTG ATTTTGCCGC CCGCCGTCCC CGTCAACTCT CCGGCGGTCA ACAGCAGCGA GTGGCGCTGG CGCGTGCGCT CGTCAACCAT CCCGAAGTGC TGCTGCTCGA TGAGCCGCTC GGTGCGCTCG ACCTGAAACT GCGCAAAGAG ATGCAACTCG AACTGAAAAG CCTGCAAGAA CGGGTCGGCA TAACCTTCAT CTATGTCACC CACGATCAGG AAGAAGCGCT GACGATGAGC GACCGGATCG CAGTGATGAG CGCCGGGAAG GTGTTGCAGA TCGGCACGCC GACCGAAATC TATGAGCGCC CGGTCTGCCG TTTTGTCGCC GATTTCATCG GCGAGACCAA CTTCATCGAA GGAAAGGTCG AAGCGGTTGA GCGCGATGGA ATCGCCTCCA TCCTTTCCGA TGACGGGTTG ACGCTGCGAG GGCAGACCAT CCGCCCGGTT GCGTCGGGAG CGCACGTCAC CCTCTCGATC CGTCCAGAGA AGGCGTTCCT TTCAGTGCAG GCGCCGCCGC CCGGCACGCC GAACTGCTAT CAGGTGCGGG TGGAACGGGT GGCGTATATC GGGAGTGATA CGCGCATCGA TGTGCGCTTG GGATCGCGAT TGTTCGATCT CTGGGAACAG AACAGTCGCT CGACGCTCGA CCGCGACGCC TACTGGCAAC CCGGCGAAAC AGGGTATCTC TGGTGGCCCG CCGAAAATGC GATTATTCTG ACCGAGTGA
|
Protein sequence | MQAGRAMNQG IAVDLRNVVK RFADVCAVDH VSMQIRDGEF FSMLGPSGCG KTTTLRMIAG FEFPTSGDIL LHGRSVGTTP PFRRNVNTVF QSYALFPHMT VAENVAFGLR MKKVPQSEIA RRVTEALDMV RLGDFAARRP RQLSGGQQQR VALARALVNH PEVLLLDEPL GALDLKLRKE MQLELKSLQE RVGITFIYVT HDQEEALTMS DRIAVMSAGK VLQIGTPTEI YERPVCRFVA DFIGETNFIE GKVEAVERDG IASILSDDGL TLRGQTIRPV ASGAHVTLSI RPEKAFLSVQ APPPGTPNCY QVRVERVAYI GSDTRIDVRL GSRLFDLWEQ NSRSTLDRDA YWQPGETGYL WWPAENAIIL TE
|
| |