Gene RoseRS_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1641 
Symbol 
ID5208596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2014894 
End bp2016012 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content60% 
IMG OID640595247 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_001275983 
Protein GI148655778 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCG GACGCGCTAT GAACCAAGGG ATAGCAGTTG ATCTGCGCAA TGTCGTCAAG 
CGATTCGCAG ATGTCTGCGC CGTCGATCAC GTCTCCATGC AGATCCGCGA CGGTGAATTC
TTCTCGATGC TCGGTCCCTC CGGTTGCGGC AAAACCACTA CCCTGCGGAT GATTGCCGGT
TTCGAGTTTC CCACGTCGGG CGATATCCTG CTCCACGGCA GATCGGTCGG AACCACGCCA
CCCTTCCGGC GCAATGTGAA TACCGTCTTT CAGTCGTATG CGCTGTTTCC GCATATGACG
GTGGCGGAGA ATGTCGCCTT CGGTTTGCGC ATGAAGAAGG TTCCGCAATC CGAAATTGCG
CGGCGGGTGA CCGAGGCGCT CGATATGGTG CGCCTGGGTG ATTTTGCCGC CCGCCGTCCC
CGTCAACTCT CCGGCGGTCA ACAGCAGCGA GTGGCGCTGG CGCGTGCGCT CGTCAACCAT
CCCGAAGTGC TGCTGCTCGA TGAGCCGCTC GGTGCGCTCG ACCTGAAACT GCGCAAAGAG
ATGCAACTCG AACTGAAAAG CCTGCAAGAA CGGGTCGGCA TAACCTTCAT CTATGTCACC
CACGATCAGG AAGAAGCGCT GACGATGAGC GACCGGATCG CAGTGATGAG CGCCGGGAAG
GTGTTGCAGA TCGGCACGCC GACCGAAATC TATGAGCGCC CGGTCTGCCG TTTTGTCGCC
GATTTCATCG GCGAGACCAA CTTCATCGAA GGAAAGGTCG AAGCGGTTGA GCGCGATGGA
ATCGCCTCCA TCCTTTCCGA TGACGGGTTG ACGCTGCGAG GGCAGACCAT CCGCCCGGTT
GCGTCGGGAG CGCACGTCAC CCTCTCGATC CGTCCAGAGA AGGCGTTCCT TTCAGTGCAG
GCGCCGCCGC CCGGCACGCC GAACTGCTAT CAGGTGCGGG TGGAACGGGT GGCGTATATC
GGGAGTGATA CGCGCATCGA TGTGCGCTTG GGATCGCGAT TGTTCGATCT CTGGGAACAG
AACAGTCGCT CGACGCTCGA CCGCGACGCC TACTGGCAAC CCGGCGAAAC AGGGTATCTC
TGGTGGCCCG CCGAAAATGC GATTATTCTG ACCGAGTGA
 
Protein sequence
MQAGRAMNQG IAVDLRNVVK RFADVCAVDH VSMQIRDGEF FSMLGPSGCG KTTTLRMIAG 
FEFPTSGDIL LHGRSVGTTP PFRRNVNTVF QSYALFPHMT VAENVAFGLR MKKVPQSEIA
RRVTEALDMV RLGDFAARRP RQLSGGQQQR VALARALVNH PEVLLLDEPL GALDLKLRKE
MQLELKSLQE RVGITFIYVT HDQEEALTMS DRIAVMSAGK VLQIGTPTEI YERPVCRFVA
DFIGETNFIE GKVEAVERDG IASILSDDGL TLRGQTIRPV ASGAHVTLSI RPEKAFLSVQ
APPPGTPNCY QVRVERVAYI GSDTRIDVRL GSRLFDLWEQ NSRSTLDRDA YWQPGETGYL
WWPAENAIIL TE