Gene RoseRS_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1621 
Symbol 
ID5208576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1989773 
End bp1990465 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID640595227 
ProductFHA domain-containing protein 
Protein accessionYP_001275963 
Protein GI148655758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.437766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAC TGTTGTTGAT GAGTGCTCTG ATCCTTGTTC TCGCTGCATG CGGGACGCCC 
GCCGCAACAG GGAACGGCGC GCCTGCACCG GCGACCGGTG AGACTGCGGC GCTGCCTTCC
GCCACACCAC TGCCCACGGG TGAAGCGGCG ACGCCTCTGG TTGTTGAACC TTCGGCGACG
CCTGCCGCTA CGTTGCCCAC GGATGAAGCG GAAACGCCAC AAGCCGAACC TCAGACGACG
CCGGTGATCG AACCTCCTTC TGCCGCCAGC CCAACGACCG CTGCATCGCC ACAACCGACG
CCTGCCGCGC CACAGGCGAC CATTGCAGCC ACGCCGGTTC CGCCGCCACC GAACGTTACC
ACGCTGGCGT TGCCCAGTCC GGCACTGCAA CCACCGCCAG CGATGGTTGG CGAACAGGCG
GTGTTGCCCA ACGATCTGCT GACGCGCCTG ATCGATGACC TGGCGCTGCG GAGCAGCAGC
GATCCAGCAG CGATCAGTCT GGTCGGCGCT GAGGCGGTGA TCTGGAACGA CGGATCGCTC
GGTTGCCCGC AACCAGGGGT TGCCTACCCA CAGGTGCAGA TCGAGGGATA CCGGGTGCTG
TTGCGCATTG GCGACCGCGA CTACGACTAT CGCGTTGGAA GGCGCGGATC GTTCGTGCTC
TGCGAACAGG GCCGCCCGGT GCGTTCGCCG TAA
 
Protein sequence
MRALLLMSAL ILVLAACGTP AATGNGAPAP ATGETAALPS ATPLPTGEAA TPLVVEPSAT 
PAATLPTDEA ETPQAEPQTT PVIEPPSAAS PTTAASPQPT PAAPQATIAA TPVPPPPNVT
TLALPSPALQ PPPAMVGEQA VLPNDLLTRL IDDLALRSSS DPAAISLVGA EAVIWNDGSL
GCPQPGVAYP QVQIEGYRVL LRIGDRDYDY RVGRRGSFVL CEQGRPVRSP