Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1619 |
Symbol | |
ID | 5208574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1985362 |
End bp | 1988061 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595225 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001275961 |
Protein GI | 148655756 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGGC TTGTATCGGT CTTCCGCTCA CACATCCGAT ACAAAATCAT CCTCCCCTAC CTGGCGCTGA CCCTGGTGGT GATGATGGCG GGGGCGGCGA TTGCCGTTGG TCTGGTGGCG GCCTCGTGGG AAGAGCGGTT GCAGAACCAG CTTGCGCAGG TGGCGCGTAA CACCACCGAT GCCCTGGTGC GCCGCGAGCG CAACAATCTG GAGTTCTTGC GGCAGGTGGT GTTCGCGCCG GCCAACCAGG ATATTCCGGC AGTCGCCGAT GCGTTTGCCA GCGGTGACGA TGAGCAGGTT ATGCGCGCAC TCGAACCGTA CTATCGTTTT GGCGTTGGGA GCGTTAACCT CGATTTTGAC CGCATGATCG CCTTTGATCG CAACGGCAAG ACTCTCGTCG ACTGGTTGCG CGTTTCAGAA GACCCTGACG CCCTGCCTGC CCGGATCACG ACGACCGATC TGTCGGGGCT GGATTTTGTG CGCGCGATTG TCTCAGGAAC AACGATTGAC GGAAACGATA AATTTGCGAA CCTGATCTAC TTTGCGCCTG ATGTGCAACC CTATTTCTAC ACCGTTGCGC CGGTGCGCCG GGGAAATGAC GTCGTCGGCG GGGTTCTGAT TGCGGTCAAG TGTGATCGTT TGCTCGCTTC ACTCGAACGA AGCAGTCAGG CAGCAGTGAC CACCTTCTAC GACCTGTCGG GGCGGGCGAT CAGCACCACC CTGTTGCCGC GCGCAGAGTT GAGCACCCTC GATATGCCGC CGCAGGTGCT GCAGGCATTG CTCAACGGGC AGGCGCAGTC GATCTTCACT GTCGAACTGC GCCAGCGCGG GTATCAACTG GCGTACAGTC CGCTGGTGAT AGCGAATGTT CAGGTCGGTT ACTTCTCGGT CGGTCTCTCG CGCGATTTTC AGGTGCAGCA GTTGTCGCTC AGTCGCAATA TCGTGACGGC GATTGCCATC GTGCTGGCAA CCGGGTCGGT AATTCTGGGG TATCAGATTG CGCGGCGGAT CACCCGCCCG CTGGCGGATC TGGTGGCGAC TGCCGAAGCA GTGACGGGCG GCGATCTCGA AGCGCGCACC ACAGTCATGT CGCCGGATGA ATTCGGTCGT CTGGCGCTGG CGTTCAATCA GATGACCGAG CATCTGGCGC GATTGTACCG CACGAGTCGC GACCTCAATC AGGCTATCGA GGTGACGCCG GTATTGAAGG TGGCGGAACG CGCCGTGCGT TCCCTGTTGC CCGATGCGGA CGTGCTGGCG TTGATCGCCG AGGAAGGCGC GTTGCGCTAC CATGTCGATG AAGGGCTGCC CGCCATCGTG CGCAGTCTGC GCCACGTTCG GGTGCCGGTG AGCGATCCGC TGGTGCGCGA GATCAGTGAA ACGCAACAGG CGGTGCTGCT GTCGTCGCAG GATGAGCCGC GCCTGACGGC GTTCGGTCTC ACGCAGGTCG CCGGATATCA GAGTCTGCTG CTCTCCCCGC TGGTCGTTCA GGATGAACCG GCTGGCGTGC TGATCATCGC GCACCGTGAA CCCGCCGCAT TTACCGGCAG TGTGCTGCCA TCGGTGGTTG CGATTGCCAA CATGACGACC AGTGTGCTGT ACAACGCCGT GCTGTTTGAC CGGGTTCAGC GCGAAGCGCT ACGGCGACGC GCCATTCTCG AGTCGATTGC CGATGGCGTT GTGGTGCTGG ATCGCCAGCG TCGGATCCTG ATCGTCAACC GTGCTGCCGA GCAGATGCTG GGCATGAGCG ACTGGCGCCT GGTGCAGCGT TCGTTCAGCG ATATACCGCT GACGCGCGTT GAAGTCCGCC ACGAGATGTT CAGCGAGAAT GGCGCTACCC AGCGCGACCT GTACCGCCTG GGTGATCGCG TCCTGCGGTT GAGCCACGCA CCCGTAACGA CCGACGAGGG GACGCAGATC GGCGAAGTGG TGGTGCTGCA CGATATTTCG GCGGAGGTCG CCGTCGATCA GGCGAAAACC GATTTTATCG CCACGATTTC CCACGAATTG CGTTCGCCGC TGACGGTGAT CTACGGCTAC ACCGATCTGC TGCTGCGCGG CATGGTCGGC GAGTTGAGCG GCGAGCAGCG CGATCTGCTC GAAGCGGTGC GCAACCGCGT TGAGTTGATG AACAATATCG TCAGGAATGT CATCATGGTC GCCAGTATCG AAGCCAACAC GTTGCAGACC GACTTCGCAG CGCAGGATGT GCGCCGGATG ATCGATGAAG CGGTCGCGCC GATGCGGAAG TCGTTCGAGA AGAAGGGGCT GGCGTTGACC GTGACAACGC CCGACGATCT GCCGCCGGTG CGCGCCGACC GTGAGCAGCT GTTGATTATC CTGGGACAGG TGATTGATAA CGCGCGGCGC TATACTCAGC AGGGCGAAGT GACAATCACG GCGCATCAAC GCGACAATGG CATGGTGCAG ATCGATGTTT CCGATACAGG ACCGGGCATT CCTGCCGATG CGATGAACCG ATTGTTCACG CGCTTCTTCC GTGTCGAAGG GAACAATTCT CCCGAACGCG GCAGCGGTCT GGGACTGGTC ATCACCCGGC AACTGGTCGA ACGTCACGGC GGAAAGGTGT GGGCGCACAG CGAAGTTGGG CGCGGCAGCA CATTCAGCAT AGCACTCCCT ATCGCCCATG AGTACACAAA CACCATCACC AGCCCGGGCG GAACGGGCGC GACAGCCTGA
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Protein sequence | MRGLVSVFRS HIRYKIILPY LALTLVVMMA GAAIAVGLVA ASWEERLQNQ LAQVARNTTD ALVRRERNNL EFLRQVVFAP ANQDIPAVAD AFASGDDEQV MRALEPYYRF GVGSVNLDFD RMIAFDRNGK TLVDWLRVSE DPDALPARIT TTDLSGLDFV RAIVSGTTID GNDKFANLIY FAPDVQPYFY TVAPVRRGND VVGGVLIAVK CDRLLASLER SSQAAVTTFY DLSGRAISTT LLPRAELSTL DMPPQVLQAL LNGQAQSIFT VELRQRGYQL AYSPLVIANV QVGYFSVGLS RDFQVQQLSL SRNIVTAIAI VLATGSVILG YQIARRITRP LADLVATAEA VTGGDLEART TVMSPDEFGR LALAFNQMTE HLARLYRTSR DLNQAIEVTP VLKVAERAVR SLLPDADVLA LIAEEGALRY HVDEGLPAIV RSLRHVRVPV SDPLVREISE TQQAVLLSSQ DEPRLTAFGL TQVAGYQSLL LSPLVVQDEP AGVLIIAHRE PAAFTGSVLP SVVAIANMTT SVLYNAVLFD RVQREALRRR AILESIADGV VVLDRQRRIL IVNRAAEQML GMSDWRLVQR SFSDIPLTRV EVRHEMFSEN GATQRDLYRL GDRVLRLSHA PVTTDEGTQI GEVVVLHDIS AEVAVDQAKT DFIATISHEL RSPLTVIYGY TDLLLRGMVG ELSGEQRDLL EAVRNRVELM NNIVRNVIMV ASIEANTLQT DFAAQDVRRM IDEAVAPMRK SFEKKGLALT VTTPDDLPPV RADREQLLII LGQVIDNARR YTQQGEVTIT AHQRDNGMVQ IDVSDTGPGI PADAMNRLFT RFFRVEGNNS PERGSGLGLV ITRQLVERHG GKVWAHSEVG RGSTFSIALP IAHEYTNTIT SPGGTGATA
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