Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1618 |
Symbol | |
ID | 5208573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1983080 |
End bp | 1985215 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640595224 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001275960 |
Protein GI | 148655755 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2203] FOG: GAF domain [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.491163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCTC AGGTTCCGAC AAATCAGATG TATGACATCG TCGAATGGAC CTCCAGCGAT GATCCGCTTC TGGAGAGTCT GGGACGGATC GCACAATCGG TTGAGCGCGC CACGACTCTC GACCAACTGC TGCACCTCTC ACTGATCGAG TTGACCCGTC TCTGCCGCGC GGATCGTGCG ATTGCGCTAC TGAAGGACGT TCAGGGGCGG GCAGTATGGG TCTGTGAATA TCCTCAATCC GGCGATGCCC CTGAGTTGAC GCTGGACGCT ATATCGGGCG CTGCGGACGC AATGCGACTG CGGCGCCCGA TAATTGTGCA TCCCCAAGAA CAGGCATTGC TGGCGCGCGA CGTTCGGGTG CTGCTGGTCG CGCCGCTGAT CGCCCGTGAC GAAACGCTTG GCGCTCTGGC TATCTGTAGC GCTCATGCCA CGCGGACATT CGATAGCAAG GATGTGGCGC TCATCAGGGC GCTGAGCGGG CAGATCGCGC TGGTAATCAT GTCGCACCGC AGTTGCGAAT CGGTCGAGCG ACGCACGCAA GAACTCAAAA CCCTCAACGA TATTGCGTCA GTTGTCACAT CGACGCTCGA TACCCGTGAA GTGTACCGCC TGGTCGTCCA GCAACTCAGC GATTATTTTC ACGTCGAAGC CGGTTCGTTA CTGCTCGTTG ATGAAGCGAC CGGCGACCTC GAGTTTGTGA TGACCATCGA AGGCGGCGAA GAAAAGCTTG CCGGTTTTCG CGTTCCGGCT GGACAGGGTG TTGTCGGGCA TGTGGTGCGC ACCGGTCGAT GGGAGATCGT GCACGATGTC AGCCGCGATC CGCGCTTCTA TCGCCAGATT AGCGAGGCGA CCGGTTTTTC GACGCGCTCG ATCCTGTGTG TGCCGATGAT TGCCAAGGGG CGGGTCATCG GCGCCATCGA ACTGCTGAAC AAGATCGGCG GGGATTTCGA CGAAGAGGAT GCGCTGCGGT TGATGCGCAT GGCTGCGTTC ATTGCGGTTG CCATCGAGAA TGCCCGCCTG TTCCAACAGG TGACTGCGGG GCGTGATCGC ATGGCATCCG TGCTTCGCTC AACTGCCGAT GGCATTCTGA TGGCCGATAT GCGCGGCGAG ATACAGATCG CCAATCCGCT GGCGGTTGAG ATTTGCGGAT GTCCAGAAGA GTCGTTGATC GGCCGGCGGA TCGACGATGT CGTGGCGGAA TTGTATGCGC GCGCCCACGA CATCACGACC CCATCGTGGA GCCAGGAGGT TGCGGTACCG GCGCAGATCA GCGATCTGGC GTTTGCGAGC GGAGCGCACC GGTATGTGCG CCTGATCCGT CTCCCTGTCT ACGATGCCCA GAATGAGCCG CGCGGCGAGT TGCTGATCCT TCGCGATATT ACGCAGGAAC GCGATCTGGA ACAGTTGCGC GAGGATTACA CCAGTATGCT GGTGCACGAC CTGCGCGCAC CGCTTACATC GATCATGAAC GGCGTGATGA TGCTTCAGCG CGGCATCGTC GGACCGGTGA CCGAACAGCA GCAGGAGTTG CTGAAGATCG CCTATCAGGG CAGTCAGACG ATGCTGCACC TGATCAATAC GCTGCTCGAT ATCTCAAAGA TGGAACAGGG CCGGATGGAC CTGGACCTCA AGCCATTGCC GATCTTCAGC GTCATCGATC AGGCAATCGA GCGCCTGCAG CATCTGGCCA GCAGTCGCGG CGTGACGATT GAACAACGCC TGGCGCCCTA TCTCCCGCCG GTCGAGATCG ATGGCGAAAA GATCGTGCGC GTGTTGCAGA ACCTGCTCGA TAATGCGATC AAGTTCTCTC CGGCGCAGGG CGTGGTGACT ATCGGCGCGT TCCTGGCAGG AGGAACACAT GCACCGCCGG ATGATGTACC GGTGCATGTG ACGTTCAACG ATTCACGAGA CTATCTGGTC GTATGGGTGC AGGACCGCGG TCCGGGCATT CCACCTGCCT ATTTTCAGCG CATCTTCGAA AAGTTCGGTC AGGTGCGCGG GCGAAAGGTG CGCGGGACCG GGCTGGGGTT GACCTTCTGC CGCCTGGCAG TGGAAGCGCA CGGCGGGCGC ATCTGGGTTG AGAGCGAAGA AGGCGCCGGG AGCGTGTTCG CATTTGCACT GCCCATCAAT GGATAG
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Protein sequence | MEAQVPTNQM YDIVEWTSSD DPLLESLGRI AQSVERATTL DQLLHLSLIE LTRLCRADRA IALLKDVQGR AVWVCEYPQS GDAPELTLDA ISGAADAMRL RRPIIVHPQE QALLARDVRV LLVAPLIARD ETLGALAICS AHATRTFDSK DVALIRALSG QIALVIMSHR SCESVERRTQ ELKTLNDIAS VVTSTLDTRE VYRLVVQQLS DYFHVEAGSL LLVDEATGDL EFVMTIEGGE EKLAGFRVPA GQGVVGHVVR TGRWEIVHDV SRDPRFYRQI SEATGFSTRS ILCVPMIAKG RVIGAIELLN KIGGDFDEED ALRLMRMAAF IAVAIENARL FQQVTAGRDR MASVLRSTAD GILMADMRGE IQIANPLAVE ICGCPEESLI GRRIDDVVAE LYARAHDITT PSWSQEVAVP AQISDLAFAS GAHRYVRLIR LPVYDAQNEP RGELLILRDI TQERDLEQLR EDYTSMLVHD LRAPLTSIMN GVMMLQRGIV GPVTEQQQEL LKIAYQGSQT MLHLINTLLD ISKMEQGRMD LDLKPLPIFS VIDQAIERLQ HLASSRGVTI EQRLAPYLPP VEIDGEKIVR VLQNLLDNAI KFSPAQGVVT IGAFLAGGTH APPDDVPVHV TFNDSRDYLV VWVQDRGPGI PPAYFQRIFE KFGQVRGRKV RGTGLGLTFC RLAVEAHGGR IWVESEEGAG SVFAFALPIN G
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