Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1616 |
Symbol | |
ID | 5208571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1980063 |
End bp | 1981499 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640595222 |
Product | hypothetical protein |
Protein accession | YP_001275958 |
Protein GI | 148655753 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0937959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.686129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCT GCCCGCAGTG TCAGGCTGAA CTTGAGGAAG GAAAACGCTT CTGCCCGCAG TGCGGTGCGC GTTTGACGGA ACCAACAGGC GATGCTGGCA AAACCACGGT CACACCGCCA GAGCCGCCGG GCGACGTCGG GCGCACGGTG CTGCTGCCGC CGGAAGGCGA CGCTGGTAAA ACCATGGTCG CGCCGCCGCA ACCGCCGGGC GACGTCGGGC GCACGGTGCT GCTGCCGCCG GAAGGCGACG CTGGTAAAAC CATGGTCGCG CCGCCGCAAC CGCCGGGCGA CGTCGGGCGC ACGGTGCTGC TGCCGCCGGA AGGCGACGCT GGTAAAACCA TGGTCACGCC GCCGCAACCG ACTTCGTCAG GTGCACCATC GAGCAGTGCA GGATTGCAGA CGATCCTCGA AGATCCAGCC CGCAGGCAAT CGCCGTCTCC TGCGGGTGGC AGCTTCGGAT TGCCTCCCGC CGCCCCGCCG ACCACCCCTT CAGCAGGTGG CGGATTCGGT CTGCCGCCAT CACCGCCGCC CCCTGCCGGG GGCGGATTCG GCTTGCCTCC GGCAGCCCCA CCGACCACCC CTTCAGCAGG CGGCGGATTC GGTGTGCCGC CATCACCGCC GCCCCCTGCG GGCGGTGGAG CGGGGAGGCT TCCCCCAGTC CCGCCATCGG CGGTTAGGGG CGCATCGGGC GCTCCTGCTG CCACGACAAC TGCAAAGAAG GGACCGAACT GGCTGCTGAT CATCGGTATC ATTCTTGGCG TCCTGGTGCT GGCGTGCGTC CTCATCCTCG GCAGCTTGTA CTGGATCGGT CAGCAGGCGG CTCAATCATT GGGCACAGCC GTTGCTGTCA CCGCGGTCAG CATTGGCGAA CCATCGGCAT CGACCGATTT CCCCAACGTG CTGCTGCGCG ATTCGCTCGC CAGCGAAGCG ACCAGTCAGT TTACTGCTGG ACAAACGGAG AGCGGCGATT ACCGTTTTGA GAATGGCGCC TTTGTGATCG AATCGCTCGA CACCGATCAG ATCGTCTGGC AGACCATCGA CGAGGTGGTT GATGATGCGT CGTTCGAGAT CGAGGCGACG GTCGATAAGC CGCGCAGTGC AGCCATTGCG CTGCTCTTCC GCTATCAGGA CAATCAGAAT TTCTACATCC TCAACATTGA TGGCCGCGGA CGCTACCGCG TTGCGCGCTA TGTGAACGAT GAATTCTCGG TTCTGAGCGA CTGGAAGACT TCTCCGGCGA TCAATGCCGC CGGTTCGTCC AACCGGTTGC GGATCGACAT GGCTGGCGAT GCGCTGACCT TCTTCTGCAA TGGACAGCGT CTCACCAGTC TACGCGATAG CGCCTTCCGT AGCGGCAATC TTGCATTCGG CACGGAAACA TTCGATGAAG GACAGGGAGT GGTTCGTTTC ACTAACCTGG TGGTGCGTGG TCGGTAG
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Protein sequence | MIRCPQCQAE LEEGKRFCPQ CGARLTEPTG DAGKTTVTPP EPPGDVGRTV LLPPEGDAGK TMVAPPQPPG DVGRTVLLPP EGDAGKTMVA PPQPPGDVGR TVLLPPEGDA GKTMVTPPQP TSSGAPSSSA GLQTILEDPA RRQSPSPAGG SFGLPPAAPP TTPSAGGGFG LPPSPPPPAG GGFGLPPAAP PTTPSAGGGF GVPPSPPPPA GGGAGRLPPV PPSAVRGASG APAATTTAKK GPNWLLIIGI ILGVLVLACV LILGSLYWIG QQAAQSLGTA VAVTAVSIGE PSASTDFPNV LLRDSLASEA TSQFTAGQTE SGDYRFENGA FVIESLDTDQ IVWQTIDEVV DDASFEIEAT VDKPRSAAIA LLFRYQDNQN FYILNIDGRG RYRVARYVND EFSVLSDWKT SPAINAAGSS NRLRIDMAGD ALTFFCNGQR LTSLRDSAFR SGNLAFGTET FDEGQGVVRF TNLVVRGR
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