Gene RoseRS_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1613 
Symbol 
ID5208568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1975637 
End bp1976065 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID640595219 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_001275955 
Protein GI148655750 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000741517 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.883947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGG CACAAACTGG CGACACCGTG ACAGTGCACT ACACCGGCAC GCTGGAAGAT 
GGGACTGTCT TCGACAGTTC GCACGGTCGC GAACCGCTGG TGTTTACACT GGGCAGCGGG
CAGGTCATCC AGGGGTTCGA GGAGGCGGTG ATCGGGATGC AGGAGGGGGA GAAGCGCCGC
GCGGTGTTGA CGCCAGATCA GGCATACGGT GAGTACCACG ATGAACTGAT CTTTTCGCTG
AACCGCGATG AGCTGCCGCC CCAGATCGAC CCGGCGATCG GTGAGCAGTA TCAGATGCGT
CGCCCGGACG GGCAGACATT CATCGTCACG GTGCGCGATG TGTCGCCGTC CGAAGTGACG
TTCGACGCCA ACCATCCGCT GGCTGGCGCG ACGCTGACCT TCGATATCGA ACTGGTGGCG
ATCGAGTAG
 
Protein sequence
MATAQTGDTV TVHYTGTLED GTVFDSSHGR EPLVFTLGSG QVIQGFEEAV IGMQEGEKRR 
AVLTPDQAYG EYHDELIFSL NRDELPPQID PAIGEQYQMR RPDGQTFIVT VRDVSPSEVT
FDANHPLAGA TLTFDIELVA IE