| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1597 |
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| Symbol | |
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| ID | 5208552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1949051 |
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| End bp | 1950859 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640595203 |
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| Product | Allergen V5/Tpx-1 family protein |
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| Protein accession | YP_001275939 |
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| Protein GI | 148655734 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGAT TACTGCACCT GTTCCTTCTG GCTGGTCTTC TGATCGCTCT GGCGCATTAC
GTGCCGTATT CACATCCGTC GCCATCTCGT GCACTGGCGC ACGCCGAACC CGCATATCAG
ACCGCCGATC TGCTCTACAA TGAAGCGCGT ACAGTCCACC TGGGAAATCT CGCCAGACGC
GCCAATGGCA TTCCGCCGTT GCGCTGGAAC CGCCAGTTGA CCGCTGCAGC GCGCTGGTTC
GCGTGGGACT CGACCGAGAA TCGTCCCATC GGGTATTGTG GCCACCAGGA CACGAACGGA
AACTGGCCCG TCTACCGGGC GCGCGCCTTC GGGTACCTGG GATTCGCAGG CGCAGAGAAT
GCGTTCTGTG GGTACGTTCC CCCCGAAGGC GCCATTGAAG GGTGGATGAA CAGTCCCGGG
CATCGCGCCA ATTTGCTCGA CCCCGCCTCG CGCGAAGTGG GACTTGGATA CTACCAACGT
TCCGGTGATG GGCGCGGTTA TATCGCGCAA AAATTTGGCG TCGATTCCGC CTATGCACCC
GTCATTATCG AAAACGAAGC GCCTTTCACT TCCAACCCCA GCGTCAACCT GTATATCTAC
AACCGGACGG AGCAGAGCGG TTTTGCGAGC ATGGGTCCGG CAACGCAGAT GATGGTCAGC
AACGATGCCT GTTTTAGCGA CCGTGCGTGG GAGCCGTTTG CCAGCCACAA GACGTGGACG
CTGGAAGGCG GTCAGGGCTG GCGCACCGTG TATGTCAAAA CGCGCGATGC ACTCAATCGC
ACCGCAACGG TGAGCGATAC GATTTACCTG GGAGAACCGC TGCCAGTGCA GGAACTCAGC
GACGCGCATC TCAGCACGAC GCAGCCATAT GTGACCCTGT ACCATCTCGA TGGCGGCGGC
CTGCCAATGG TGCAGTTCAG TCCGGGGTGG ATCGCCGATG ATACCTATCC GACATTTGGC
AGGTTGTGGG GAGCCGGTGA ACGTATCAGT GATCCCGACG CCTGGGGCGG CACAGCGTAT
CGACTCTTGC CGGGTAGCGG CGAGACATCG GCATGGGTGT GGGACACCAC ATTCATCAAG
GACACGCCGA TGACAGCATA CATACGGTTG AAGACGGGCA GTAACGTCTC GAATCAAGAA
ATAGCGCAGG TGACGGTCAA GGGCGGCGGT GTCGAGTATG GTCCGCGCCG ACTGCGCGGC
GTCGATTTTG CCGCGCCCAA CCAGTATCAG GAGTTCGCAA TCGATTTTAC GTTTCATTCG
AACCCGAACG AGCCATTTCT CATCTTCCAG TTCTGGCGTA GCGGCACTAC CGATATTTAC
GTAGACGCAG TGACCATCTT CAGCAGACCC CAACCGATAA CCAGTCCATT GACGTGGAAC
GTGCCGGGCG GTAATTATCG CGGTCAGGGC GTTTGGGTGC GCTACACGGA CGGTGTGCGC
TTTTCGGGGA TGGTCGAAGC TGCGACAACA CCAATGCAAC TCTTCGTATC CCCGACAGAA
CTGACATTCC TGGCAGCCAG GGATGGAACC CCTCCGCCTG CTGCATTTTT GCGGGTGGCG
CCGGTATGTG CGGCGTTTAC CTGGGAGATC AGCCATGATG CGCCCTGGTT GAATGCAGAG
AAAACAGGGA GCGGCGCCAG AATCAGCGTG AACCCGGCTG GACTGAGCAA CGGCATCTAT
TCAGGCAATG TCACGGTACG GGCAACCGGG GGCGCCAGTA CAGCGTCAGT TTCCGTTCCC
GTCAGATTGA TCGTCGTGGA TCGTTTGTTC CCGGTCTATC TTCCGCTGAC AGCCAGGGGC
TACTGGTGA
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| Protein sequence | MRRLLHLFLL AGLLIALAHY VPYSHPSPSR ALAHAEPAYQ TADLLYNEAR TVHLGNLARR
ANGIPPLRWN RQLTAAARWF AWDSTENRPI GYCGHQDTNG NWPVYRARAF GYLGFAGAEN
AFCGYVPPEG AIEGWMNSPG HRANLLDPAS REVGLGYYQR SGDGRGYIAQ KFGVDSAYAP
VIIENEAPFT SNPSVNLYIY NRTEQSGFAS MGPATQMMVS NDACFSDRAW EPFASHKTWT
LEGGQGWRTV YVKTRDALNR TATVSDTIYL GEPLPVQELS DAHLSTTQPY VTLYHLDGGG
LPMVQFSPGW IADDTYPTFG RLWGAGERIS DPDAWGGTAY RLLPGSGETS AWVWDTTFIK
DTPMTAYIRL KTGSNVSNQE IAQVTVKGGG VEYGPRRLRG VDFAAPNQYQ EFAIDFTFHS
NPNEPFLIFQ FWRSGTTDIY VDAVTIFSRP QPITSPLTWN VPGGNYRGQG VWVRYTDGVR
FSGMVEAATT PMQLFVSPTE LTFLAARDGT PPPAAFLRVA PVCAAFTWEI SHDAPWLNAE
KTGSGARISV NPAGLSNGIY SGNVTVRATG GASTASVSVP VRLIVVDRLF PVYLPLTARG
YW
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