| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1583 |
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| Symbol | |
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| ID | 5208538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1935821 |
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| End bp | 1937479 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595189 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_001275925 |
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| Protein GI | 148655720 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACGC ACATACCTGT ATTTATGCAC ACATTTGCAC AACTCTACGC CACACTCGAT
GAAACCACCC GAACCAGCGT GAAAATCGAG GCGCTGACGC GCTACTTTGA GCGCTCAGAA
CCGGCTGACG CTGCGTGGGC GATCTTTTTC CTTATCGGTC GGCGAGTGCG GCAGGCTGTG
CCTTTGCCAA CACTGCGCGC CTGGGCAGTC GAAGCGGCTG GCATTCCCGA CTGGCTCTTC
GGCGAGTGTT ACGATGCCGT CGGCGACTTT GCCGAGACGG TCACGCTGCT TCTGCTGGAG
CCGGACGAGT GGACGGTGGA CGTCGACCGT TCCGTTCTGC CGTTTGAAGG TCCACAACCA
CTCCACCGCT GGGTTGAGGA GGTGCTGCTC CCCCTGCGCG ACCAGGACGA AACGATGCAA
CGCGCGATTG TGCAGGCGGT GTGGGCGACG CTTGGCGGAA CAGAACGCTT TGTATGGAAC
AAATTGATCA CCGGTGCATT TCGGGTTGGC GTCTCACAGC AACTGGTGGT GCGCGCGCTT
GCCCGTGTCA GTGGCGTCGA TTCGTCCACG ATTGCGCATC GTCTGATGGG TGAATGGACC
CCGTCGGAGA CATTCTACCG GACGCTCCTG GCGCGTGACA CAACCGACGC CGATGTGAGT
CGGCCCTACC CCTTCTGTCT GGCGCACCCG CTCGATGCCG ATCCCGAAAC CCTCGGACCA
ATCGATGAAT GGCAGGCGGA GTGGAAATGG GACGGCATCC GGAGTCAGTT GATCCGCCGC
GCCGGGCGGA CATTTCTCTG GTCGCGCGGC GAGGAACTGA TCACCGACCG TTTCCCCGAA
ATTGCAGCGA TTGGCGCGCT GCTCCCCGAT GGCATCGTCA TCGACGGCGA GGTATTGCCT
TGGAAGGATG GCGTCGTGCT CCCCTTCGCG CAGTTGCAGC GTCGGATCGG ACGCAGGAAC
CTGACGAAGG CTATCCTGGA CGAAGCGCCG GTTGCGTTGC TGGCGTATGA TCTGCTCGAA
CTCAACGGCG TCGATGTGCG CAATCAGCCG CTGGAGCGGC GTCGGGCGGA ACTCGAACGC
CTGATCGCAA CCTGTGTGCC GGGCAATCAG GCGCTCCTGA TTTCGCCGGT GGTCGTCGCG
GCAGATTGGG ACGATCTTGC GGCGCAGTGG GCCACATCGC GCGAACGCAA TGTCGAAGGT
CTGATGCTCA AGCGTCGCAG TTCACCGTAC CGTGTCGGGC GGGTGCGCGG CGACTGGTGG
AAGTGGAAAG TCGCGCCCTA CACCATCGAT GCGGTGCTGA TCTATGCGCA GCGCGGCAGC
GGCAAGCGCG CCAGTCTCTA CACCGACTAC ACCTTCGCCG TGTGGGACGG CGACCGGTTG
ACGCCGTTCG CCAAAGCGTA TTCCGGGCTG ACCGACGAGG AGATCCGGCA GGTTGACGCA
TTCGTAAGAC GCAATACACT GGAAAAGTTT GGACCGGTGC GCACCGTCAC TCCGGAGCTG
GTCTTTGAAC TGGCATTCGA GGGTATTCAG CGCTCGAATC GTCACAAATC GGGAATTGCG
GTGCGCTTCC CGCGCATCCT GCGCTGGCGG CGCGACAAGC GTCCGGCTGA TGCCGACACG
CTGGAACAGG TGCGCGCCAT GTTGCCAGAG GAATCATGA
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| Protein sequence | METHIPVFMH TFAQLYATLD ETTRTSVKIE ALTRYFERSE PADAAWAIFF LIGRRVRQAV
PLPTLRAWAV EAAGIPDWLF GECYDAVGDF AETVTLLLLE PDEWTVDVDR SVLPFEGPQP
LHRWVEEVLL PLRDQDETMQ RAIVQAVWAT LGGTERFVWN KLITGAFRVG VSQQLVVRAL
ARVSGVDSST IAHRLMGEWT PSETFYRTLL ARDTTDADVS RPYPFCLAHP LDADPETLGP
IDEWQAEWKW DGIRSQLIRR AGRTFLWSRG EELITDRFPE IAAIGALLPD GIVIDGEVLP
WKDGVVLPFA QLQRRIGRRN LTKAILDEAP VALLAYDLLE LNGVDVRNQP LERRRAELER
LIATCVPGNQ ALLISPVVVA ADWDDLAAQW ATSRERNVEG LMLKRRSSPY RVGRVRGDWW
KWKVAPYTID AVLIYAQRGS GKRASLYTDY TFAVWDGDRL TPFAKAYSGL TDEEIRQVDA
FVRRNTLEKF GPVRTVTPEL VFELAFEGIQ RSNRHKSGIA VRFPRILRWR RDKRPADADT
LEQVRAMLPE ES
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