| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1580 |
|---|
| Symbol | |
|---|
| ID | 5208535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1932595 |
|---|
| End bp | 1933524 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640595186 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_001275922 |
|---|
| Protein GI | 148655717 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0863941 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCG CAATCGGCGA TCTGGTATGG GATGTTCTGG TAAAGCCGGA CGGACTGCTG
CTTCCTGGCG GTGACACCAC CGGCAGCATC AAACTTGCGC CGGGGGGATC GGCGGCAAAC
GTGGCTGCAT GGGTTGCGCG CTGCGGCGCG CCTGCCGGGT TCATCGGCGC GCTGGGCGCG
GATGTGTTCG GCGATCTCAT CGCTGCCGAC CTGCAACGCG AGGGGGTCGA GACGCATATT
GTTCGCCTGC GCCACAGTGA AACCGGCGTG GTTCTGGCGC TGATTGATCG CGCCGGGCAG
CGAAGTATGG TAACCAACCG TGGCGCCGAT CATCAACTTA TGCCGGATAT GACGCCGGAA
GGCGTGTTGC GTTCGTGCAG CCATCTCCAT GTTACCGGAT GGTCGCTCTT CAGCGACCCG
CCGCGCGCCG CCGCCCTGCA TGCTGCACGC ATCGCCAGCG CATTCGGCGC CACCATTTCG
TTCGACCCGG CATCGTACCA GATCATCCGC GAGATCGGGC ACGATCAGTT CGACCGGATC
ACCGCCGATC TGCCGGTGGA CATGCTGTTC CCCAACCGCG ACGAGGGGGA AGCGCTGACC
GGTGAACGCG AGCCGCAGGC AATTGCGGCA GCGCTGCGCG AACGTTTCCC CGGCGCGCTG
GTGGCGCTCA AACTGGATCG GGATGGATGC TTTATCATGA CGCACACGCT GATAGCGCAT
ATTCCCGGAC AGGTCATCGG CACGCCGGTT GACACGACCG GTGCGGGCGA TGCCTTCAAC
GGCGCATTTC TGGCGCGTTA CCTGACCACC GGCGACGCCG CTGGCGCTGC GCGTTTTGCC
AACCAGATCG GGGCGTGGGT GGCGCAGCGG AGCGGCGCGC GCCCGCCGAT CGACGACGAA
CTCCGCCAGA TTCTTAGCGA TAGCCGATAG
|
|---|
| Protein sequence | MIIAIGDLVW DVLVKPDGLL LPGGDTTGSI KLAPGGSAAN VAAWVARCGA PAGFIGALGA
DVFGDLIAAD LQREGVETHI VRLRHSETGV VLALIDRAGQ RSMVTNRGAD HQLMPDMTPE
GVLRSCSHLH VTGWSLFSDP PRAAALHAAR IASAFGATIS FDPASYQIIR EIGHDQFDRI
TADLPVDMLF PNRDEGEALT GEREPQAIAA ALRERFPGAL VALKLDRDGC FIMTHTLIAH
IPGQVIGTPV DTTGAGDAFN GAFLARYLTT GDAAGAARFA NQIGAWVAQR SGARPPIDDE
LRQILSDSR
|
|---|
| |