| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1572 |
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| Symbol | |
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| ID | 5208527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1921592 |
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| End bp | 1922839 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595178 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001275914 |
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| Protein GI | 148655709 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.58248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAT CCACGTCTTC GATGAACCCC TCCCGTTTCG TGGCGCTGCG CTATCGCGAC
TTCCGGCTCC TCTGGCTTGG TCAGTTTGTG TCGATCACCG GCACGCAGAT GCGCAACGTG
GCTATCGCCT GGCAGATCTA TCAACTGGCG CGTGTTGACA GCAGCATTCA GCCTGAACTC
GCACTCGGTC TGATCGGTCT GGCGCGCGTC GTCCCACTGG TTGTCACGGC GCTCGTGAGC
GGTATGGTCG CAGATCGCGT CGAACGACGC AGCATGCTGA TCCTGACTTC GCTGGCAGCG
CTTGGGTGCT CAGTTGTACT CGCGTTCGCC GCCGAAACGG AGCGCCCGCC GCTGGCGCTG
ATCTACGCGA TGGTGGCGCT GGCATCGGTG GCAGGCGCGT TCGAGTTGCC AGCGCGTCAG
GCGATTATTC CCAATCTCGT GGCGCCGCAG CATCTGCCCA ATGCCCTGAG CCTGAATATC
GTCGCCTGGC AACTTGCGAC CGTGATCGGT CCGGCGTTGT CCGGCATCCT GATCGCGGCG
GTTGGGGTTG CACCGGTGTA CTGGATCGAT GCTGCCAGTT TTCTCGCAGT GGTTGTTGCA
GCGCTACTTA TGCGCACGCG CAATCTCCCC GCGCGCGCTG AACCGGTCTC GTTGCAGGCG
GCGCTGGCAG GGTTGCGCTT CGTCTTTTCG CATCGCCTGA TTGCAGCAAC GATGCTGCTT
GATTTCTTTG CCACGTTCTT TGGCGCTACC GGTGTGTTGC TGCCGGTCTT CGCCGATCAG
GTGCTGCGGG TTGGTCCAAC CGAACTGGGC TGGATGTATG CAGCGCCATC GGTCGGCGCG
GTGATCGCCG CCACGCTGCT GAGCGGCGTG CGCATCCCGC GTCAGGGGAT GACGCTCCTG
GCGGCAGTGC TGCTCTTTGG CGTATGCGTC GTGATCATCG GCGTGTCGCG CTGGCTGCCG
TTGACACTGC TGGCGCTGGC AGGCATGGGC GCGGCGGATA CGGTCAGCAT GGTGATCCGC
GGCACGATCC GTCAGTTGCT GACCCCCGAT GAGTTGCGCG GAAGAATGGT GGCGGTCACG
ATGATCTTTT TTGCTGGCGG TCCGCAACTG GGTGAAACCA ATGCCGGGTT TATCGCCAGT
CTCATCGGCG CGCCTGCAGC AGTGGCGATC GATGGTGCGG CGTGTATCGT CATAGTGATC
GGGACGGCGC TCAAGGTTCG TGAGTTGCGC CAGTATGACG GTTCGTGA
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| Protein sequence | MNPSTSSMNP SRFVALRYRD FRLLWLGQFV SITGTQMRNV AIAWQIYQLA RVDSSIQPEL
ALGLIGLARV VPLVVTALVS GMVADRVERR SMLILTSLAA LGCSVVLAFA AETERPPLAL
IYAMVALASV AGAFELPARQ AIIPNLVAPQ HLPNALSLNI VAWQLATVIG PALSGILIAA
VGVAPVYWID AASFLAVVVA ALLMRTRNLP ARAEPVSLQA ALAGLRFVFS HRLIAATMLL
DFFATFFGAT GVLLPVFADQ VLRVGPTELG WMYAAPSVGA VIAATLLSGV RIPRQGMTLL
AAVLLFGVCV VIIGVSRWLP LTLLALAGMG AADTVSMVIR GTIRQLLTPD ELRGRMVAVT
MIFFAGGPQL GETNAGFIAS LIGAPAAVAI DGAACIVIVI GTALKVRELR QYDGS
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