| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1548 |
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| Symbol | |
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| ID | 5208503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1892318 |
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| End bp | 1893868 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595154 |
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| Product | putative delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_001275890 |
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| Protein GI | 148655685 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01237] delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCC CCCCATTCCG AAATGAACCG TACACCGACT TTAACGATCC CGCCAATATC
GCTGCCATGG AGCAGGCGCT GGCGCACGTC CGGGCGCAGT TCGGTCGCAC CTATCCGCTG
ATTATCGACG GCGAACGGAT CGCCACCAGC GAAACCATAG CATCGGTCAA CCCGGCGCGA
CCTGCCGAAG TGGTCGGGTA TGCGGCGAGC GCCGATGTCG CTCTGGCGCA GCGCGCGATC
GAGACGGCGC ACCGCCGCTT TGCCGAATGG CGTCGTGCGC CGGTCGAGCA GCGTGTCGAT
CTGTTGTTGA AGGCTGCGGC TGCCATGCGT GCGCGTCGCT TTGAGTTGAA TGCCTGGATT
GTGTACGAGG TCAGCAAGAG TTGGTCCGAG GCGGACGCCG ATGTTGCCGA AGCGATTGAC
TTTTGCGAAT TCTATGCGCG CGAAATGCTG CGCCTGAGCG AGCCGCAGCC GCTCTACCCC
ATCCCTGGCG AGGATGACCG GCTGACGTAT ATTCCGCTCG GTGCAGGCGT GGCGATCCCG
CCATGGAATT TCCCGCTTGC CATTATGGTT GGTCTGGTGA CGGCGCCGGT TGTTGCCGGC
AATACGATTG TGCTCAAACC GGCTTCGACC GCGCCGATCA TTGCAGCAAA GTTTATGGAA
ATCCTGGAAG AATGCGGTTT ACCGCCCGGC GTGGTCAATT ACCTCCCCGG TCCCGGCAGC
AGCGTCGGTG ATGCGCTGGT CGATCATCCC CTGACGCGCT TCATCGGCTT CACCGGCTCG
AAGGAAGTCG GGCTTCGCAT CTTTGAGCGT GCGGCAAAGG TGCATCCGGG GCAGAAGTGG
CTTAAGCGCA CCATTCTTGA GATGGGTGGC AAGGATACGA TCATCGTGGA CGAAACTGCG
GACCTGGAGG CGGCGGCTTC GGGGATTGTC GTCTCCGCGT TCGGTTTCCA GGGGCAGAAG
TGCTCGGCGT GCTCGCGGGT CGTTGCCGTC GAACCGGTCT ACAATGAGTT GCTCGACCGG
GTGATCGAGT TGACCGGTGG GTTGACGGTC GGCGATCCGG CACAGCGCGG GACGTTCATG
GGTGCAGTGA TCGATGCACG TTCGCAGGAG AAGATTCGCC GGTATATCGA GGAAGGGCAG
CGTGAAGGCG GTCGGCTGGC GTTCAGCGGT GACGCGCCCG CTGATGGCTA TTTCGTGCCG
CCGACGATCA TCGCCGATGT GGACCCCAAT GCGCGTATCG CCCAGGAGGA GATTTTCGGT
CCGGTGCTGG CGTTCATCAA AGCGCGCGAC TTCGATGAGG CGCTGGCGAT TGCGAACAAT
ACCGAGTATG GTCTCACCGG CGGCGTCTAT TCCCGTTCGC GGGAACGGTT GGAGCGCGCC
CGCGATGAGT TCCATGTTGG CAACCTGTAC TTCAACCGCA AGATCACCGG CGCAATGGTC
GGCGCCCATC CGTTCGGCGG TTTCAATATG TCCGGCACCG ACTCGAAAGC CGGCGGGCGG
GATTATCTGC TGCTCTTCCT GCAAGCCAAG ACGGTCGCCG AGAAGTTGTG A
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| Protein sequence | MDLPPFRNEP YTDFNDPANI AAMEQALAHV RAQFGRTYPL IIDGERIATS ETIASVNPAR
PAEVVGYAAS ADVALAQRAI ETAHRRFAEW RRAPVEQRVD LLLKAAAAMR ARRFELNAWI
VYEVSKSWSE ADADVAEAID FCEFYAREML RLSEPQPLYP IPGEDDRLTY IPLGAGVAIP
PWNFPLAIMV GLVTAPVVAG NTIVLKPAST APIIAAKFME ILEECGLPPG VVNYLPGPGS
SVGDALVDHP LTRFIGFTGS KEVGLRIFER AAKVHPGQKW LKRTILEMGG KDTIIVDETA
DLEAAASGIV VSAFGFQGQK CSACSRVVAV EPVYNELLDR VIELTGGLTV GDPAQRGTFM
GAVIDARSQE KIRRYIEEGQ REGGRLAFSG DAPADGYFVP PTIIADVDPN ARIAQEEIFG
PVLAFIKARD FDEALAIANN TEYGLTGGVY SRSRERLERA RDEFHVGNLY FNRKITGAMV
GAHPFGGFNM SGTDSKAGGR DYLLLFLQAK TVAEKL
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