Gene RoseRS_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1541 
Symbol 
ID5208496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1882083 
End bp1882844 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content61% 
IMG OID640595148 
Productcyclase family protein 
Protein accessionYP_001275884 
Protein GI148655679 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.711446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCT TTGATCTCAG CGTTCCGACC GAGATGAGTC CCAGCGAAGT CGAGCCGGTG 
CAGGTCGAGC ATATCGATCA CAAACAGACG GCGGCGTTCA TGGCGAGTTT TTTTGGCGCA
ACGGTCGATG ATCTTCCTGA AGGCAACGGG TGGGCGAACG ATCAGGTGAC AATTCGCGCC
CACGCCGGCA CCCACGTTGA TGCGCCGTGG CACTACTACC CGACATGTGG CGGCGCGCGC
GCCCGCACCA TCGATGAAAT GCCGCTCGAA TGGTTCTACG GCGATGGGGT TGTGCTCGAT
ATGCGCCACA AGCCGCGTGG CAGTCTCATC GACATCGACG ATCTGCGCAC AGCGCTCGAC
GCGATTGGGT ATACGCTCAA ACCGGGCGAC ATCGTGCTGA TCCAGACCGG CGCGGATAAA
CTATGGGGAC AGGCGGAGTA TTTTGCTGCC GGCGCTGGCA TGAGCGCTGC CGCAACCCGC
TGGTTGATCG AGCAGGGCAT TCGCACCATG GGCATCGACG CCTGGGGGTG GGATCAACCG
TTCTGGGCGA TGAAAGAGCG CTTTCAGCAG ACCGGCGACC CCTCGGTGAT CTGGGAGGCG
CATCGTGTCG GGCGCGACCT TGAGTACTGC CACATCGAGA AACTTGCCAA CCTCGACGCG
CTGCCGCGTC CTTTCGGGTT CAAGGTCGCC TGCTTCCCGG TCAAACTCAC CGGCGGCAGC
GCCGGTTGGA CGCGGGTCGT GGCGATTTTT GACGATCTGT AA
 
Protein sequence
MKIFDLSVPT EMSPSEVEPV QVEHIDHKQT AAFMASFFGA TVDDLPEGNG WANDQVTIRA 
HAGTHVDAPW HYYPTCGGAR ARTIDEMPLE WFYGDGVVLD MRHKPRGSLI DIDDLRTALD
AIGYTLKPGD IVLIQTGADK LWGQAEYFAA GAGMSAAATR WLIEQGIRTM GIDAWGWDQP
FWAMKERFQQ TGDPSVIWEA HRVGRDLEYC HIEKLANLDA LPRPFGFKVA CFPVKLTGGS
AGWTRVVAIF DDL