Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1541 |
Symbol | |
ID | 5208496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1882083 |
End bp | 1882844 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595148 |
Product | cyclase family protein |
Protein accession | YP_001275884 |
Protein GI | 148655679 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.711446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCT TTGATCTCAG CGTTCCGACC GAGATGAGTC CCAGCGAAGT CGAGCCGGTG CAGGTCGAGC ATATCGATCA CAAACAGACG GCGGCGTTCA TGGCGAGTTT TTTTGGCGCA ACGGTCGATG ATCTTCCTGA AGGCAACGGG TGGGCGAACG ATCAGGTGAC AATTCGCGCC CACGCCGGCA CCCACGTTGA TGCGCCGTGG CACTACTACC CGACATGTGG CGGCGCGCGC GCCCGCACCA TCGATGAAAT GCCGCTCGAA TGGTTCTACG GCGATGGGGT TGTGCTCGAT ATGCGCCACA AGCCGCGTGG CAGTCTCATC GACATCGACG ATCTGCGCAC AGCGCTCGAC GCGATTGGGT ATACGCTCAA ACCGGGCGAC ATCGTGCTGA TCCAGACCGG CGCGGATAAA CTATGGGGAC AGGCGGAGTA TTTTGCTGCC GGCGCTGGCA TGAGCGCTGC CGCAACCCGC TGGTTGATCG AGCAGGGCAT TCGCACCATG GGCATCGACG CCTGGGGGTG GGATCAACCG TTCTGGGCGA TGAAAGAGCG CTTTCAGCAG ACCGGCGACC CCTCGGTGAT CTGGGAGGCG CATCGTGTCG GGCGCGACCT TGAGTACTGC CACATCGAGA AACTTGCCAA CCTCGACGCG CTGCCGCGTC CTTTCGGGTT CAAGGTCGCC TGCTTCCCGG TCAAACTCAC CGGCGGCAGC GCCGGTTGGA CGCGGGTCGT GGCGATTTTT GACGATCTGT AA
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Protein sequence | MKIFDLSVPT EMSPSEVEPV QVEHIDHKQT AAFMASFFGA TVDDLPEGNG WANDQVTIRA HAGTHVDAPW HYYPTCGGAR ARTIDEMPLE WFYGDGVVLD MRHKPRGSLI DIDDLRTALD AIGYTLKPGD IVLIQTGADK LWGQAEYFAA GAGMSAAATR WLIEQGIRTM GIDAWGWDQP FWAMKERFQQ TGDPSVIWEA HRVGRDLEYC HIEKLANLDA LPRPFGFKVA CFPVKLTGGS AGWTRVVAIF DDL
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