Gene RoseRS_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1536 
Symbol 
ID5208491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1877768 
End bp1878733 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content63% 
IMG OID640595143 
Producthypothetical protein 
Protein accessionYP_001275879 
Protein GI148655674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.406119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCTA TCAGATTCAT CATCATCGTT GTCGTGTCGG CGCTGGCGTT GGTTTCGTGC 
AGTGTAGCGT CATTACCGGC AAGTCAGCCA GCTCAGCCTG AGTTTGTTCC AATACCGACG
GCAGCGCCAG CCGCCGGGGC GCCGGCGCTG GAACGCGGCA GTGGCGCAGC GCCTGAACCT
GCGCCCTCGC AGGACATCCC GGCATCAGAC CGTCTGATCA TCAAGAATGC CTCGATTTCC
CTGGAAGTGG TGAACGTTGG CGAAGCGGAA GCGGCCATTC GCCAGACAGC GGCGCGACTC
GGCGGCTTTG TGGTGAGCAC AGAAACGTAT GGCACCGGCG ACGCGATGCG GTCAACCATC
GTTTTCCGCG TGCCTGCGGC GCGTTTCGAT GAGGCGCTCA GCGGCGTGGA AGGGCTGGCG
AAGAAGGTGT TGAGCCGTAA TATCAGTGGC GAAGATGTCA CCGAAGAGTA TGTCGATCTC
GAGTCGCGGC TACGCAACCT GGAAGCGACG CGTGACCGTC TATTCGACCT GTTGCAGCGT
ACCGACAAGG TTGAAGATGC GCTGCGTGTG AACCAGGCGT TGAGCGATGT TCAGGAGCAG
ATTGAGCGGA TCAAGGGGCG GATGCAATAC CTGCAACGCA GCGCAGCCAT GTCGACCATC
ACCGCAGAAC TGCGCCCCGT GCCGCCGCCG CCGTCGATCA TCGAGGAAGA TGCATGGCAG
CCGATCAATG TGGCGCGTGA GGCGTTGCGC GGCCTGCTCG AATTCGGGCA GGGGTTGGTG
AACCTGCTGA TCGTTCTGGG TATCTGGACG CCGGTCTGGT TGCCGGTGGT TCTGTTCGGG
CGCTGGAGCT GGCGCAAGAT CACGCGCGGC GGGAAGAAAC CGGAGCAACC GACGCTGCCA
GCGACACCGC CGTCGGCGCC GATGCCTCCA TCGGGCGGCG AAACGGGCAG TGGCGCGTCA
CAGTAG
 
Protein sequence
MASIRFIIIV VVSALALVSC SVASLPASQP AQPEFVPIPT AAPAAGAPAL ERGSGAAPEP 
APSQDIPASD RLIIKNASIS LEVVNVGEAE AAIRQTAARL GGFVVSTETY GTGDAMRSTI
VFRVPAARFD EALSGVEGLA KKVLSRNISG EDVTEEYVDL ESRLRNLEAT RDRLFDLLQR
TDKVEDALRV NQALSDVQEQ IERIKGRMQY LQRSAAMSTI TAELRPVPPP PSIIEEDAWQ
PINVAREALR GLLEFGQGLV NLLIVLGIWT PVWLPVVLFG RWSWRKITRG GKKPEQPTLP
ATPPSAPMPP SGGETGSGAS Q