Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1535 |
Symbol | |
ID | 5208490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1874973 |
End bp | 1876772 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640595142 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_001275878 |
Protein GI | 148655673 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.495544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTAC AGGCGCTCTA CCGCCGCTAC CGATCACAGA CGTTCGATGA GTTGATCGGG CAGGAACACG TTGTCCGCAC ACTCCGGAAC GCGATTGCGG AGGGCCGGGT TGCGCATGCC TACCTGTTCA CCGGTCCGCG CGGCGTCGGT AAGACGACCG TTGCGCGTCT GCTGGCGAAG GCGGTCAACT GCACCGCGCC GCCGGCAGAA CGTCCGTGTG GCGTGTGCGA GTCGTGCCGC GCTATTGCCG AAGGACATGC TGTTGACGTG ATCGAAATGG ACGCTGCATC GCACACGAGC GTCGAAGATG CGCGCGAGAT CATCGAGCGC GTGCAGTTCC GCCCGGCAGT TGCGCGCACC AAGGTCTACA TCATCGACGA AGTGCATATG CTCTCGACGG CGGCGTTCAA TGCGCTGTTG AAGACGCTCG AAGAGCCGCC GCCGCACGCG CTCTTCATCC TGGCGACGAC CGAGGTCCAC AAGGTGCCGG CGACGATCCT GTCGCGCTGT CAGCGTTTCG TCTTCAACCG CCATACCGTT GCCTCGATTG CGGCGCACCT GCGGTCGATC GCGGCTCAGG AAGGCGTCAC TCTGGAAGCG GGCGTCGCCG AAGCGATTGC CCGCGCCGCT ACCGGCAGTA TGCGCGATGC GCTCAGTGTG CTCGACCAGT TGATGGCATA CGGTGGCGGA ACCATATCGC TCGAACAGGT GCGGAACCTG CTTGGCGCCG GCGAAATGCA GGAAGTGACG GCGCTGGCGG ACGCACTGAT CGCCGGTGAT CTGCCGGGCG CGCTGCAGGT GATCGCCAAT GTCGCCGCTG CGGGCGCCGA CCTGCGTCAG TTTACCCGCG ATCTGGTCGA GCGGCTGCGC GCCGTGATGC TGCTCCGCGC TGGCGCCGAT CGTTCGCTCC TTGATGTTGC CGAAGAAGAA GCAGTGCAGA TCGAGCGTCA GGCGCACAGC GCTGATCTCG GCGCCCTGAT GCGTTGGGTC AAACTGTTCA GCGAACTGGA TTACCAGTTG CGCGTCAGTT CCTATGGTCA ACTCCCGCTC GAACTGGCGG TTATCGAGGC CGTGATCGCA CCGGCGCCGG CAACGGCAAT GGCAGGCGCC CCGACTGTTG CATCGCGTCC CGTTGTTCGC CCCGAACGCA AAACGCCGCC GTCTCCCCCG GCAGTACAAC CAACGACCGG AACATCCGGC ACCCCCCCCA TCATCGAGAC CGCGTCCCCT TCCGGTGCTT CACCCGTTGC CGAACCAGCG CCCCAACCCG GTATTCCGGC AGACATGGCA ACCCCCCAGA CGTCGCCACC CCAGCCGGTT GCGCCAGACG ACCCGCGCAT CCAGCATCAG GCGCAAACCC GGCGCGCGTC CGAACCGCCG GTCGAAACCG GCGAAGGCGT GGCCGCCGCG AATGCCGATG CCGCCGCGCT GGAACAGATC GAAAGCATCT GGCACAACAT CACGCGCGAT GTGCGCGTTC ACGACAAAAC CCTCCAGGCG TTACTCAACA GCGGCGTTCG CCCGGTCGAT GTCAAGGATG GCACACTGAT CCTGGAAGTG CCGAGCGAGT GGTTTGTTGC CAGGCTGGAG AAGCCGGCGG TACGCCAGAT CGTCGAGCAG GTGATCAGCA AACACATGGG CACGATGTTT TCCATTCGCT GCGTTGTCGA AGCGCAGCGG CGCGAGAATC CCGGCGCTCT GCGCGAGCAG ATCCGTGCAA CGCGCAAAGA TCCGCTCGTT CGCGCAGCGC TCAACATTTT CGACGCCGAC ATTATTGCTG TGGAAGATCC GAATGCATAA
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Protein sequence | MTVQALYRRY RSQTFDELIG QEHVVRTLRN AIAEGRVAHA YLFTGPRGVG KTTVARLLAK AVNCTAPPAE RPCGVCESCR AIAEGHAVDV IEMDAASHTS VEDAREIIER VQFRPAVART KVYIIDEVHM LSTAAFNALL KTLEEPPPHA LFILATTEVH KVPATILSRC QRFVFNRHTV ASIAAHLRSI AAQEGVTLEA GVAEAIARAA TGSMRDALSV LDQLMAYGGG TISLEQVRNL LGAGEMQEVT ALADALIAGD LPGALQVIAN VAAAGADLRQ FTRDLVERLR AVMLLRAGAD RSLLDVAEEE AVQIERQAHS ADLGALMRWV KLFSELDYQL RVSSYGQLPL ELAVIEAVIA PAPATAMAGA PTVASRPVVR PERKTPPSPP AVQPTTGTSG TPPIIETASP SGASPVAEPA PQPGIPADMA TPQTSPPQPV APDDPRIQHQ AQTRRASEPP VETGEGVAAA NADAAALEQI ESIWHNITRD VRVHDKTLQA LLNSGVRPVD VKDGTLILEV PSEWFVARLE KPAVRQIVEQ VISKHMGTMF SIRCVVEAQR RENPGALREQ IRATRKDPLV RAALNIFDAD IIAVEDPNA
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