Gene RoseRS_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1535 
Symbol 
ID5208490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1874973 
End bp1876772 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content64% 
IMG OID640595142 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_001275878 
Protein GI148655673 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.495544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAC AGGCGCTCTA CCGCCGCTAC CGATCACAGA CGTTCGATGA GTTGATCGGG 
CAGGAACACG TTGTCCGCAC ACTCCGGAAC GCGATTGCGG AGGGCCGGGT TGCGCATGCC
TACCTGTTCA CCGGTCCGCG CGGCGTCGGT AAGACGACCG TTGCGCGTCT GCTGGCGAAG
GCGGTCAACT GCACCGCGCC GCCGGCAGAA CGTCCGTGTG GCGTGTGCGA GTCGTGCCGC
GCTATTGCCG AAGGACATGC TGTTGACGTG ATCGAAATGG ACGCTGCATC GCACACGAGC
GTCGAAGATG CGCGCGAGAT CATCGAGCGC GTGCAGTTCC GCCCGGCAGT TGCGCGCACC
AAGGTCTACA TCATCGACGA AGTGCATATG CTCTCGACGG CGGCGTTCAA TGCGCTGTTG
AAGACGCTCG AAGAGCCGCC GCCGCACGCG CTCTTCATCC TGGCGACGAC CGAGGTCCAC
AAGGTGCCGG CGACGATCCT GTCGCGCTGT CAGCGTTTCG TCTTCAACCG CCATACCGTT
GCCTCGATTG CGGCGCACCT GCGGTCGATC GCGGCTCAGG AAGGCGTCAC TCTGGAAGCG
GGCGTCGCCG AAGCGATTGC CCGCGCCGCT ACCGGCAGTA TGCGCGATGC GCTCAGTGTG
CTCGACCAGT TGATGGCATA CGGTGGCGGA ACCATATCGC TCGAACAGGT GCGGAACCTG
CTTGGCGCCG GCGAAATGCA GGAAGTGACG GCGCTGGCGG ACGCACTGAT CGCCGGTGAT
CTGCCGGGCG CGCTGCAGGT GATCGCCAAT GTCGCCGCTG CGGGCGCCGA CCTGCGTCAG
TTTACCCGCG ATCTGGTCGA GCGGCTGCGC GCCGTGATGC TGCTCCGCGC TGGCGCCGAT
CGTTCGCTCC TTGATGTTGC CGAAGAAGAA GCAGTGCAGA TCGAGCGTCA GGCGCACAGC
GCTGATCTCG GCGCCCTGAT GCGTTGGGTC AAACTGTTCA GCGAACTGGA TTACCAGTTG
CGCGTCAGTT CCTATGGTCA ACTCCCGCTC GAACTGGCGG TTATCGAGGC CGTGATCGCA
CCGGCGCCGG CAACGGCAAT GGCAGGCGCC CCGACTGTTG CATCGCGTCC CGTTGTTCGC
CCCGAACGCA AAACGCCGCC GTCTCCCCCG GCAGTACAAC CAACGACCGG AACATCCGGC
ACCCCCCCCA TCATCGAGAC CGCGTCCCCT TCCGGTGCTT CACCCGTTGC CGAACCAGCG
CCCCAACCCG GTATTCCGGC AGACATGGCA ACCCCCCAGA CGTCGCCACC CCAGCCGGTT
GCGCCAGACG ACCCGCGCAT CCAGCATCAG GCGCAAACCC GGCGCGCGTC CGAACCGCCG
GTCGAAACCG GCGAAGGCGT GGCCGCCGCG AATGCCGATG CCGCCGCGCT GGAACAGATC
GAAAGCATCT GGCACAACAT CACGCGCGAT GTGCGCGTTC ACGACAAAAC CCTCCAGGCG
TTACTCAACA GCGGCGTTCG CCCGGTCGAT GTCAAGGATG GCACACTGAT CCTGGAAGTG
CCGAGCGAGT GGTTTGTTGC CAGGCTGGAG AAGCCGGCGG TACGCCAGAT CGTCGAGCAG
GTGATCAGCA AACACATGGG CACGATGTTT TCCATTCGCT GCGTTGTCGA AGCGCAGCGG
CGCGAGAATC CCGGCGCTCT GCGCGAGCAG ATCCGTGCAA CGCGCAAAGA TCCGCTCGTT
CGCGCAGCGC TCAACATTTT CGACGCCGAC ATTATTGCTG TGGAAGATCC GAATGCATAA
 
Protein sequence
MTVQALYRRY RSQTFDELIG QEHVVRTLRN AIAEGRVAHA YLFTGPRGVG KTTVARLLAK 
AVNCTAPPAE RPCGVCESCR AIAEGHAVDV IEMDAASHTS VEDAREIIER VQFRPAVART
KVYIIDEVHM LSTAAFNALL KTLEEPPPHA LFILATTEVH KVPATILSRC QRFVFNRHTV
ASIAAHLRSI AAQEGVTLEA GVAEAIARAA TGSMRDALSV LDQLMAYGGG TISLEQVRNL
LGAGEMQEVT ALADALIAGD LPGALQVIAN VAAAGADLRQ FTRDLVERLR AVMLLRAGAD
RSLLDVAEEE AVQIERQAHS ADLGALMRWV KLFSELDYQL RVSSYGQLPL ELAVIEAVIA
PAPATAMAGA PTVASRPVVR PERKTPPSPP AVQPTTGTSG TPPIIETASP SGASPVAEPA
PQPGIPADMA TPQTSPPQPV APDDPRIQHQ AQTRRASEPP VETGEGVAAA NADAAALEQI
ESIWHNITRD VRVHDKTLQA LLNSGVRPVD VKDGTLILEV PSEWFVARLE KPAVRQIVEQ
VISKHMGTMF SIRCVVEAQR RENPGALREQ IRATRKDPLV RAALNIFDAD IIAVEDPNA