Gene RoseRS_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1533 
SymbolrecR 
ID5208488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1874007 
End bp1874624 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content64% 
IMG OID640595140 
Productrecombination protein RecR 
Protein accessionYP_001275876 
Protein GI148655671 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAGA CGCACGACAT CCAGATCCTG CCCGCGCCGG TCATCCGTCT GATCGAGGAG 
CTCAACCGGT TGCCCGGCGT AGGTCCCAAA ACGGCATCGC GCCTGACCTT CTTCCTGCTG
CGTGCGCCCG ATGACCTGCC GCTTGCCCTG GCGCACGCTC TGACAGCGTT GAAGCAACAG
GTGCAGTTGT GTTCGCGCTG CTATTTCATC ACCCAGGGTG ATCTGTGCGC CATCTGCGCC
AACCCTGCAC GTGATCAGCG TGTTATTTGC GTGGTCGAAG AACCGCTCGA TGTGGTGGCG
ATCGAACGCA CTGGCGTGTA CCGTGGGTTG TACCACGTGC TGCATGGGCG CATTGCGCCG
CTCGAAGGGA TGAACCGCGA GGATATCTAC TTTGACGAAC TCCTCGACCG GGTGCGCGCC
GAGCCGGTTG AGGAGGTGAT TATCGCCACC AATCCGAACC TGGAAGGCGA AGCGACAGCA
TTTCACCTGC AACGCGCCCT GGCGCCGCTC GGCGTGCGCG TGACCCGCCT GGCGCGCGGA
TTGCCCACCG GCGGCGACCT GGAGTGGGCC GACCCCGGCA CGCTGGGTTC GGCGCTCGAA
GGGCGGCGCG AGATGTAG
 
Protein sequence
MHQTHDIQIL PAPVIRLIEE LNRLPGVGPK TASRLTFFLL RAPDDLPLAL AHALTALKQQ 
VQLCSRCYFI TQGDLCAICA NPARDQRVIC VVEEPLDVVA IERTGVYRGL YHVLHGRIAP
LEGMNREDIY FDELLDRVRA EPVEEVIIAT NPNLEGEATA FHLQRALAPL GVRVTRLARG
LPTGGDLEWA DPGTLGSALE GRREM