| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1527 |
|---|
| Symbol | |
|---|
| ID | 5208482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1863753 |
|---|
| End bp | 1864526 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640595134 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001275870 |
|---|
| Protein GI | 148655665 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.284005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTCG ATGACGATAC GGCGATCAGC AGTCTGATCA GCCACCAGCT TCGCAGCCTT
GGATACCGCA CCGTGTGTCT GCAGGACGGT CTTCAGGCGC TCCAGCGCCT TGCCGTTGTT
CAGCCCGATC TGGTGCTGCT CGACGTTATG ATGCCGCATA TGAGCGGCTG GGATGTCTGC
CGCCAGATCC GCACGTGTTC TGGTACGCCG ATTATTCTTC TGACAGCCAA GGATGCCGAC
GCCGACGTGA TGACCGGTTT AAGTGCAGGG GCGGACGACT ATATTGTCAA ACCGTACCGG
ATTGCGCAGT TGCATGCGCG TATCGAGGCG GCGCTACGAA GGTCGGCGCA ACGTTCACGA
TCACGTTCCA CCACGCACAC CGCAGCGGAA GTCGTCGGCA CACCCTCGCC TGCACCGGCG
GCAACGCCAG CGCAGACATC TCCGACTGCT TCGACTGTGG TGACGGCGCC ACAGCAGCCG
CCACGTCCCC GGCTTAGCGC AACCCTGCGC GAGGAGCGCC GCCGACGAGG GGTATCGCTC
TACCAGGCGG AACAGGTCTG TCGCGTGCGA TGGGATTATC TCCAGGCGAT TGAACAGGAA
CAATGGGAGT ATGTGCCACG CGCACATCGA CAGGCGGCGA TACGAGCGTA TGCCGCATAT
CTGGGCGTTC CCCTGCGTCA TCCCCGCCCT TCCCGCATAC CGCTCGCGTC GGTGGTGGCG
CCGGCGGTCG CCGTCATGGT CATGCTGGTA GTTGCGGTCA TCTACTTCCT CTGA
|
|---|
| Protein sequence | MIVDDDTAIS SLISHQLRSL GYRTVCLQDG LQALQRLAVV QPDLVLLDVM MPHMSGWDVC
RQIRTCSGTP IILLTAKDAD ADVMTGLSAG ADDYIVKPYR IAQLHARIEA ALRRSAQRSR
SRSTTHTAAE VVGTPSPAPA ATPAQTSPTA STVVTAPQQP PRPRLSATLR EERRRRGVSL
YQAEQVCRVR WDYLQAIEQE QWEYVPRAHR QAAIRAYAAY LGVPLRHPRP SRIPLASVVA
PAVAVMVMLV VAVIYFL
|
|---|
| |