Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1501 |
Symbol | |
ID | 5208456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1827776 |
End bp | 1828294 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595110 |
Product | copper resistance protein CopC |
Protein accession | YP_001275846 |
Protein GI | 148655641 |
COG category | [R] General function prediction only |
COG ID | [COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.456265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTATCTC TGACTCGTAT GGTGCGCGTG GGTGTGGTGC TGGTCGCGCT GATAACAGGA TTCGTGGGCG CGCGCAGTGC GCTGGCGCAC GCCGACTATG TTTCGTCCGA TCCGCCAGCT GACGGAACGG TAACCACTGC TCCGGAGCGG GTCGTGATCG TCTTTTCGCA AGAACTGAAG CCGGAAGGCA ACACCATTCG CGTTACCGAC GCACGAGGCA ATCAGGTTGA TCGCGGTGAT ACCGCGCTGG ATCGTACCGA CCCGAATCGC AAAACGCTGG TTGTCTCGCT GAACCCCGGT CTAAGCGACG GGTTGTACAC GGTGAACTGG AAGAACGCCA GCACGGATGG TCACAGCGAG ACAGGACGCT TCCGCTTCCG GATCAGCAGC GGTACGGCAG CGCCTGCGCC ACTCCCGGCA ACGTCTGGCA GTGAATTGCC CTGGTTGATC ATTGCGTCGG GCGCAGGCTT GCTGCTGATC GGAGCGCTGG TGCGCCGCCA CGCATTGCGC TGGTCGTAG
|
Protein sequence | MVSLTRMVRV GVVLVALITG FVGARSALAH ADYVSSDPPA DGTVTTAPER VVIVFSQELK PEGNTIRVTD ARGNQVDRGD TALDRTDPNR KTLVVSLNPG LSDGLYTVNW KNASTDGHSE TGRFRFRISS GTAAPAPLPA TSGSELPWLI IASGAGLLLI GALVRRHALR WS
|
| |