Gene RoseRS_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1490 
Symbol 
ID5208445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1817280 
End bp1818809 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content63% 
IMG OID640595099 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001275835 
Protein GI148655630 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0815] Apolipoprotein N-acyltransferase 
TIGRFAM ID[TIGR00546] apolipoprotein N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCA CCCGAACGAG GACAGCGCCA GAGAACGCCG CAACCGCGAT GTCCTGGGGT 
ATAAGCCTGG CGCTTGCGGT TTTGTCGGGT TTCCTGATCG GCGCTTCGAT GCCAACACTG
CTCGACTGGG GTTTCCTGGG ATGGGTGGGA TTGGCGCCCG TGCTGATCGC GCTGAACGTT
CAACCGCCCC ACCGTCGCTT CCTGGTCGCA CTCCCCTTCG GCATCGTCTG GTCAGCGATG
ACGCATCTGT GGTATCCGGC GCTGTTTGGC GTCGGGATGG GAATCTTTCT TGTGGCAGCG
GTCGGCGCCT TCTATGCCGG GGTGCTTCAG GCGGGAATGG CGCTCCAGGA ACGACTCCCG
GAACCGCTGC GCATCCTGGG TATGCCAGTT GCCTGGGCAG CGCTCGAATT CGTTCGATCA
GTCGCGCCTG TTGTTGGTGA TTGGTGGATT GAATTGCTGG CAAAAAGCCA GTGGCGCTTC
CCCCCCGCGC TCCAACTCCT GGCGATCACC GGCGTTCCCG GTCTCAGTTT CCTGCTGATG
CTGGCGAATG TCGCCATTGC ACTGCTCATC CTTGAAACAT GGCGCCAGCA GCGCGTGCAT
CTACCTGCCG TTCTTGCGCT GGCAGGGTCT GCGCTCATCC TGGGGTGGGG CGCCCTGAGC
ATCCCACCAG CGCCGGATGC GCAATTCCGC ATTGCCGCAA CGGTCGATCT GGTCAACCAG
GACCGCGCCG TTCAGGCGTT GAGTCGCCTG CCTGTCGGTC AGGAAGGGTA CTACGCGGAT
ACGCCGGAGA TGTCACAGGC GATCTTCGAC ACAAATGCAA CCCTGACCCG TCAGGTGGCT
GCGTTGCGTC CCGCCTTCGT CGTGTGGCCC GAAAATGAGT TCGCCGATGC GGATGACCCC
GCGTTTGCCG CGCAGGTCGG GGCGCTGGCG CGTGAACTGA ACGCCTACCT GGTGGTGGAT
ATGGTCTGGC GAACGTCGGA AGGCATGCAC GACGCAGCAG TTCTGTTCGG ACCGGACGGT
AACGAGGTTG GTCGGCACGC CAAAATCAAT CTCACCGGCG ACGAGCAGGC TTTTGGCTTT
GTTCCCGGAC CGCGCGATTT CCAGGTCTTC ACGACGCCGT ATGGCAACGT CGGACTGGGA
GTGTGCTGGG ATCGCCACGT CCCGTGGATC ACCCGCGAAC TGGCGCGCGC CGGAGCGCAC
GTGGTGCTGA TGCCGGTGGA CGACGACTTT TATGGCAACC GCTGGTTCCC GCCGCTGCAC
GCCGCCGATT CGGTTCTGCG AGCGGCGGAG AACCGGGTCG CCTTCGGTCT GGGAGCGACC
AGCGGCATTG CGATGGTGAT CGACCCGTAT GGGCGGATCA CTGCCGAGAG CGCGATCAAT
CAGCGGGGTG TGGTGACGGG TGAAGCATTC ACTGTACCGG AGCGAACGCT CTACACCCGT
CTCGGCGATT GGTTCGGCTG GTCGATAACC GGAGCGATGG TGATCGGGCT TCTGTGGCAG
GGTCGCGGAC GCGCGCACCA TCAGCAGTGA
 
Protein sequence
MLITRTRTAP ENAATAMSWG ISLALAVLSG FLIGASMPTL LDWGFLGWVG LAPVLIALNV 
QPPHRRFLVA LPFGIVWSAM THLWYPALFG VGMGIFLVAA VGAFYAGVLQ AGMALQERLP
EPLRILGMPV AWAALEFVRS VAPVVGDWWI ELLAKSQWRF PPALQLLAIT GVPGLSFLLM
LANVAIALLI LETWRQQRVH LPAVLALAGS ALILGWGALS IPPAPDAQFR IAATVDLVNQ
DRAVQALSRL PVGQEGYYAD TPEMSQAIFD TNATLTRQVA ALRPAFVVWP ENEFADADDP
AFAAQVGALA RELNAYLVVD MVWRTSEGMH DAAVLFGPDG NEVGRHAKIN LTGDEQAFGF
VPGPRDFQVF TTPYGNVGLG VCWDRHVPWI TRELARAGAH VVLMPVDDDF YGNRWFPPLH
AADSVLRAAE NRVAFGLGAT SGIAMVIDPY GRITAESAIN QRGVVTGEAF TVPERTLYTR
LGDWFGWSIT GAMVIGLLWQ GRGRAHHQQ