| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1479 |
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| Symbol | |
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| ID | 5208434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1800175 |
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| End bp | 1803597 |
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| Gene Length | 3423 bp |
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| Protein Length | 1140 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640595089 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001275825 |
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| Protein GI | 148655620 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAA TCTTTGATAA CATCGAGAAG CATCTCTTGT CTGCCCTGAC CGATGCGATG
AAGCTGTCGG AACGGGCGGA CTTTTGCGTC GGCTACTTCA ACCTGCGTGG ATGGAAGCAA
CTATCTCCCC TCGTCGACAG GTGGGCTGGC GGTGAGGGGC ACTGTTGCCG GCTATTGGTC
GGCATGCAGC AGATGCCGCA AGACCAGCTT AAGCAGGCCC TGAGGTTCGG TAGGGATGGG
CACGACATCG ACCAGGCCAC TGCCACTGTT CTGAAGCGCA AGCTGGCCCA GGAGTTCCGC
GACCAGCTTA TCGTGGGCGT TCCGACGAAC GAGGACGAGG CAGGGCTGCA GCGCCTGGCC
TCGCAAATCG TTGCTAAGAA GGTGGTTGTC AAGCTCTTTC TGCGCCATCC GCTTCATGCC
AAGCTCTATC TGCTCTTTCG ACGAGACCCG CTCAACCCGA AGATCGGCTA CCTCGGCAGT
AGCAACCTGA CCCTGGCGGG GCTTGCCGGG CAAGGGGAGC TCAACATAGA CGTCCTCGAT
CACGACGCCT GCGACAAGCT CGCCCGATGG TTCGAGGATC GTTGGAACGA CCGATTCTGC
CTCGACATCT CTAAGGAGCT GGTCGAGATC ATCAACGAGA GCTGGGCGCG GACAGAACCG
ATCCCTCCCT ATTATATCTA CATCAAGATA GCCTACCACC TTTCTCAGGA GGCGCGGGCG
GGCCTCACCG AGTTTCGCAT CCCGAGCGAC TTCGACAATA AGCTGCTTGA GTTCCAGAAG
GCCGCCGTCA AAATCGCTGC GCATCACCTG AACAAGCGCG GCGGCGTCGT TATCGGCGAT
GTGGTCGGTC TGGGCAAGAC CCTTATGGCG ACGGCCCTGG CGCGGATTTT TGAGGACGAT
TACGGCGTTG AGACGCTCAT CATCTGCCCC AAGAACCTGG TTCCGATGTG GGAGGATTAT
CGGCAGCAAT ACCGCCTCCG CGCTATGGTG CTTTCGATCA CGCGAGTCCA GCAAGAGCTT
CCCAACCTTC GCCGCTTCCG CCTGGTCGTC ATTGACGAGA GCCACAACCT GCGCAATCGC
AACAGCAAAC GATACCGCGC CATTGCCGAT TACATCGCCT CGAATGACAG TCGCGTCATC
TTGCTGTCGG CTACGCCCTA CAACAAGACC TATCTCGACC TCTCAAACCA ACTCCGGCTG
TTCATTGACG AATCCAGGGA CATCGGCATC CGGCCGGAGA GGCTGCTGCG CGATCTGGGA
GAGACCGAAT TCGTCCGCCG CTACCAATGC CCCGTCCGGT CTCTCGCAGC ATTCGAGAAA
AGTGAGTACG CCGACGACTG GCGCGACCTT ATGCGCTTGT ATCTGATCCG CCGCACCCGC
ACCTTTATCC AGGAGAACTA CGCCAAACTC GACCCTGCTC AAAACCGCAA GTACCTCGAG
TTCGCAAACG GCGCGCGCTC CTACTTCCCG ACCCGCGTGC CGAAGACGGT CAAGTTCACG
ATCAATGAGA ACGACCCCGC CGATCAGTAC GCGCGCCTCT TCGCCGACGA CGTCGTGCAG
AGGGTGAACA ACCTCACGCT GCCACGCTAT GGACTGGGGA ATTACCTGAA GCCCTCATCC
CACAAGCGGT CCACAGCGGA AGAAGCCAGG GTGTTGGCCG ATCTCTCCCG CGCCGGCACG
CGCCTCAAGG GCTTCTGCCG CACAAACTTG TTCAAGCGCC TGGAGAGCAG CGGCTATTCC
TTCATCCTGT CGCTGGAGCG CCACATCCTG CGCAATTACA TCTTCCTCCA CGCCATTGAA
CAAGGACTGC CGCTCCCCAT CGGCGCCCAG GATATGGGCC TCCTTGACAC CTGGGCGAAT
GACCAGGACA GCGACCTGTG GGAGGCAGCG ACCGAGGACG ACAATGACGA CACGCCCAGG
GAACTGGATA AACCAGCTCG CAGCCAACTG ACGGAGCGGG AGATTCAACG CCGTGCCGCT
GGAATCTATA ACGTCTATGC CACCCAATTC AAACGCTGCT TCAAGTGGTT GAGGCTGGAA
CTCTTCAATA AAGAAGCGCT CGCCAGGGAT CTGCGCAAGG ATGCGCAGGC GCTGATGGAA
GTGCTGACGC TTGTCGGCGT GTGGGATGCC GCTCAAGACG AGAAGCTCAA AGCGCTCCTT
GAGCTCTTAA AGGAGCGACA TCCAGAGGAA AAGGTTCTCG TCTTCTCTCA GTTCGCCGAT
ACGGTCAAGT ACCTGGAGGA GCAGCTCGAA GCCCACGGAC TGCACGCTAT CGCCGCCGTG
ACGGGCGACA CCGCCGATCC GACGGCTATC GCCTACCGCT TCAGTCCCGT CAGCAATGAG
CGGCGCGACC GCATTGCTCC CGAAGACGAA CTGCGCGTCG TGCTGACGAC GGATGTTCTG
AGTGAGGGGC AGAACCTCCA GGACTGCTCC ATCATCGTCA ACTACGACCT GCCCTGGGCC
ATTATCCGGC TTATCCAGCG GGCCGGGCGC GTGGACCGGA TCGGCCAGAA ATCGGACCGG
ATTTTGTGCT ACTCGTTCCT CCCCGCCGAT GGCGTGGAAC GGATCATCCG GTTGCGCGCG
CGGGTGATGC AACGGCTCCG CGAGAACGCA GAGGTGGTCG GCGCCGATGA GGCGTTCTTT
GAAGGCGAGC GCAATGACCG GTCGCTCCAC GACCTGTACA CTGAGAAGGC GGGCATTTTA
GATGGCGATG AGGATACGGA AGTTGACCTC GCCTCCTACG CCTACCAGAT CTGGAAGAAC
GCCATTGATC AGTACCCGGA GCTTGAGAAG CTCATCCCGG CCTTACCGAA TGTGGTGTAC
TCCACGAAAC CACATCAGCC CGCCTCAGAT CGCCCCGAGG GGGCGCTGGT CTACCTTCGC
ACTGCCGAAG GCAACGACGC GCTTGCATGG ATCGACGCGC AAGGAAACAG TGTCACCGAG
TCGCAGTTTG CCATTCTTAA AGCCGCCGAG TGCGCACCAG ACACCCAGGC CCTGCCGCGC
GCCGAGAATC ACCACGACCT GGTCGCCAGA GGCGTCCAGC TTATTGTCGA GACTGAGAAG
TCGGTCGGAG GGCAGCTGGG TCGCCCGTCG GGCGCGCGTT TCCGCACCTA CGAGCGGCTC
AAAAGGTATG CGGAGCAACT CAAGGGAACG CTCTTCGAGT CGGCCGACCT GCTCAAGGCT
ATCGAGGACA TCTACAGGCA TCCCCTGCTC CAATCCGCCA CCGATACGCT CAACCGCCAG
CTCAAGAGTG GCGTTTCGGA CGAGGATCTG GCATCCCTGG TTATCGCCTT GCGACAAGAC
GGCCGCCTGT GCCGCGTGGA GGAAGATGGT GCAACAGGCG AACCCCAGGT GATTTGCTCG
CTCGGACTCC GGCGCGCGGA TTACCAGGTC CCCGGAGCCT CGTCCGGAAC AGAGAGGACG
TAG
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| Protein sequence | MPQIFDNIEK HLLSALTDAM KLSERADFCV GYFNLRGWKQ LSPLVDRWAG GEGHCCRLLV
GMQQMPQDQL KQALRFGRDG HDIDQATATV LKRKLAQEFR DQLIVGVPTN EDEAGLQRLA
SQIVAKKVVV KLFLRHPLHA KLYLLFRRDP LNPKIGYLGS SNLTLAGLAG QGELNIDVLD
HDACDKLARW FEDRWNDRFC LDISKELVEI INESWARTEP IPPYYIYIKI AYHLSQEARA
GLTEFRIPSD FDNKLLEFQK AAVKIAAHHL NKRGGVVIGD VVGLGKTLMA TALARIFEDD
YGVETLIICP KNLVPMWEDY RQQYRLRAMV LSITRVQQEL PNLRRFRLVV IDESHNLRNR
NSKRYRAIAD YIASNDSRVI LLSATPYNKT YLDLSNQLRL FIDESRDIGI RPERLLRDLG
ETEFVRRYQC PVRSLAAFEK SEYADDWRDL MRLYLIRRTR TFIQENYAKL DPAQNRKYLE
FANGARSYFP TRVPKTVKFT INENDPADQY ARLFADDVVQ RVNNLTLPRY GLGNYLKPSS
HKRSTAEEAR VLADLSRAGT RLKGFCRTNL FKRLESSGYS FILSLERHIL RNYIFLHAIE
QGLPLPIGAQ DMGLLDTWAN DQDSDLWEAA TEDDNDDTPR ELDKPARSQL TEREIQRRAA
GIYNVYATQF KRCFKWLRLE LFNKEALARD LRKDAQALME VLTLVGVWDA AQDEKLKALL
ELLKERHPEE KVLVFSQFAD TVKYLEEQLE AHGLHAIAAV TGDTADPTAI AYRFSPVSNE
RRDRIAPEDE LRVVLTTDVL SEGQNLQDCS IIVNYDLPWA IIRLIQRAGR VDRIGQKSDR
ILCYSFLPAD GVERIIRLRA RVMQRLRENA EVVGADEAFF EGERNDRSLH DLYTEKAGIL
DGDEDTEVDL ASYAYQIWKN AIDQYPELEK LIPALPNVVY STKPHQPASD RPEGALVYLR
TAEGNDALAW IDAQGNSVTE SQFAILKAAE CAPDTQALPR AENHHDLVAR GVQLIVETEK
SVGGQLGRPS GARFRTYERL KRYAEQLKGT LFESADLLKA IEDIYRHPLL QSATDTLNRQ
LKSGVSDEDL ASLVIALRQD GRLCRVEEDG ATGEPQVICS LGLRRADYQV PGASSGTERT
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