Gene RoseRS_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1462 
Symbol 
ID5208416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1777254 
End bp1777775 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content61% 
IMG OID640595071 
ProductFHA domain-containing protein 
Protein accessionYP_001275808 
Protein GI148655603 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.129326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.623454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTCT GTCCAAACTG TACGGCAAAA CAACTCGATG GCACGATCTT CTGCACTGAA 
TGCGGCGCCA GCCTGATCGA CGCCGGTCCG CCGGAGTCGA CGCGCGAACT GGATGTGGCG
GCGGTCGAAA ATCATCAAAC GCCCTCCACG TCTGGTCTGC CCTCAGACGA GAACACACTG
TCGGATCACG TCGTCGCGCT GATCGTGGTG AGCAATCGAC GCCGGATCGA GGTCGATCTG
AGCGATGAGG TGCTGATCGG GCGGGCAGAC CCGACACGCG GCATCATGCC GGATGTCGAT
CTGGGTCCGT TTGGCGGGTA TGATGCTGGC GTCTCACGCC GCCACGCGAT TCTCTCGTAT
CGTGACGGGA CGTATCGGGT GGAGGACCTT GGCAGCGCCA ACGGCACGTT CGTCAACGGT
CGGCAGATCG AACCGATGCG CGCAACGCCG GTGCAGCCCG GCGATGAGAT TATGTGTGGC
ACATTGTTGT TGCGTCTGGA AGGTCATCAT CGCAAGCGAT GA
 
Protein sequence
MIVCPNCTAK QLDGTIFCTE CGASLIDAGP PESTRELDVA AVENHQTPST SGLPSDENTL 
SDHVVALIVV SNRRRIEVDL SDEVLIGRAD PTRGIMPDVD LGPFGGYDAG VSRRHAILSY
RDGTYRVEDL GSANGTFVNG RQIEPMRATP VQPGDEIMCG TLLLRLEGHH RKR