| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1459 |
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| Symbol | |
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| ID | 5208413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1774122 |
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| End bp | 1775480 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640595068 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001275805 |
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| Protein GI | 148655600 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCG TCAAGTATCT GCTCGCCGAA GATCGGATGC CGACCGCCTG GTACAACATC
CAGGCGGACC TGCCCGTACC GCCGCCGCCG GTGCTCCATC CGGGCACGGG TCAACCGATC
GGTCCGCAGG ATCTGGCGCC GCTCTTTCCG ATGGCGCTGA TCATGCAGGA GGTGAGCACC
GGGCGTTTTA TCGAGATACC CGAAGAGGTG CAGGCGATCT ACCGTCAGTG GCGCCCGACG
CCGCTGTTTC GCGCGCGCCG CCTGGAGCGG GCGCTCGACA CGCCTGCCCG TATCTACTAC
AAGTACGAAG GAGTCAGCCC GGCGGGGAGC CATAAGCCGA ATACCGCCGT GGCGCAGGCG
TACTACAACA AGCAGGAAGG GGTCAAACGC CTGGTGACGG AAACCGGCGC AGGGCAGTGG
GGATCGTCGC TGGCGATGGC GGGCGCGTTC TTCGGGCTTG AGGTGCTGGT CTTTATGGTG
AAGGTCAGTT ATCAGCAGAA GCCGTATCGA CGGGCGCTGA TGGAAGCATA CGGCGCGCGG
GTGGTCGCCA GCCCGAGTGA GGAGACGAAC GCCGGGCGCA TGATCCTTGC CGCCCATCCC
GACAGCACCG GCAGCCTGGG GATCGCCATC TCCGAAGCCG TCGAAGTTGC GGCGCAGGAC
CCGGACGCGA AATACTCGCT CGGCAGCGTG CTCAACCACG TGCTGCTCCA TCAGACGGTC
ATCGGCGAAG AGGCGCTGGC GCAGATGGAA CTGGCGGACG ATTACCCCGA CATCATCGTC
GGGTGCACCG GCGGCGGCAG CAACTTCAGC GGCATTTCGT TCCCATTCAT CGGGAAGAAA
CTGCGCGGCG AGCGCGATGT GCGCGTGGTG GCGGTCGAAC CGGCTGCCTG TCCGAGTATG
ACGCGCGGCA GGTATGCGTA TGACTTCGGC GATACGGCAA AGATGACGCC GCTCGTCAAG
ATGCACACCC TGGGGCACGA CTTCGTGCCG CCCGGCATCC ATGCTGGCGG GTTGCGCTAC
CACGGTATGG CGCCGCTCGT CAGCCACCTG CTCGAACTGG GCGTCATCGA GGCGATCAAT
ATCCAGCAAC TCGAAACGTT CAGCGCTGGC ATCCAGTTCG CCCGCGCCGA AGGGATCATT
CCCGCGCCGG AAGCCAACCA CGCCGTCGCC GGGGCGATCC GTGAGGCGCT GCGCTGCAAG
GAGGAAGGGG TCAGTCGCGC GATCCTGTTC AACCTCTGCG GTCACGGGCA CTTCGATATG
CAGGCGTATA CCGACTACAT GGCAGGGAAA CTGCGCGACT ACGAGTACTC CGAGGAAGAG
GTCGCTATGG CGCTTGCCGG GTTGCCAGCG GTTGGATAA
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| Protein sequence | MKTVKYLLAE DRMPTAWYNI QADLPVPPPP VLHPGTGQPI GPQDLAPLFP MALIMQEVST
GRFIEIPEEV QAIYRQWRPT PLFRARRLER ALDTPARIYY KYEGVSPAGS HKPNTAVAQA
YYNKQEGVKR LVTETGAGQW GSSLAMAGAF FGLEVLVFMV KVSYQQKPYR RALMEAYGAR
VVASPSEETN AGRMILAAHP DSTGSLGIAI SEAVEVAAQD PDAKYSLGSV LNHVLLHQTV
IGEEALAQME LADDYPDIIV GCTGGGSNFS GISFPFIGKK LRGERDVRVV AVEPAACPSM
TRGRYAYDFG DTAKMTPLVK MHTLGHDFVP PGIHAGGLRY HGMAPLVSHL LELGVIEAIN
IQQLETFSAG IQFARAEGII PAPEANHAVA GAIREALRCK EEGVSRAILF NLCGHGHFDM
QAYTDYMAGK LRDYEYSEEE VAMALAGLPA VG
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