Gene RoseRS_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1456 
Symbol 
ID5208410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1770282 
End bp1771289 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content59% 
IMG OID640595065 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001275802 
Protein GI148655597 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.256847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.958171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAC CCAAAAAACG TATTCTGACC GGCGACCGCC CAACCGGGCG CATGCACCTG 
GGGCACTATG TCGGCACGCT GGCGAACCGG GTGCGGTTGC AGGATGAGTA TGAGTGCTTC
TTCCTGGTCG CCGACCTGCA TATGCTCACC ACCCGCACCG AACTTGAGCG GTTGCGGCAG
ACCGGCGAGA ACATTCGCCA TGTGGTGCTC GATAATCTGA GCGTCGGGAT CGACCCGGAG
AAATCGACCT ACTTTTTGCA ATCGATGGTG CCGGCAATCA GCGAAATTGC GCTGATCTTC
GGCATGCTGA CGACCGTGCC GCGCCTGCAA CGTGTGCCGA CGCTGAAGGA GGTGATGCAG
GATTTGCACA TCGAACAGCC GTCGTATGGG TTGCTGGGGT ATCCGGTGCT CATGGCCGCC
GACATCCTCT GTGTGCGCGC CGATCTGGTG CCGGTCGGCA AGGATCAGGC GTCGCACCTG
GAGGTGACGC GCGAAATTGC ACGCCGCTTC AATACGCTGT ATGGCGAGGT GCTGCCCGAA
CCCGAAACGC TGATCGGCGA TGTGCCGACG CTGGTGGGGA TCGATGGTCA GGCAAAAATG
TCGAAGAGCC TGGATAACGC CATCTACCTG AGCGACGACG CCCGAACGGT TGAAGAGAAG
GTGCGTCGGA TGTACACCGA TCCGAACCGT GTGCGCGCCG ATGTTCCCGG CAGGGTCGAA
GGGAACCCGG TCTTCATCTA CCACGACGCC TTCAATCCGA ATGTGGACGA GGTGAATGAC
CTGAAAGAAC GCTATCGTCA GGGGAAAGTC GGCGATGTTG AGGTCAAACG TAAACTCGCC
GCTGCAATCA ATGCGTTCCT TGAGCCGATC CGCGAGCGAC GCGCGCAGTA CGAACGCAAT
CCGCGCATCG TCGAGGAAAT CCTGGCTGCC GGTTCTGCCC GCGCGCGCGT TGAAGCCGAT
GAGACGCTCA ACCGCATGAA AGAAGCGATG GGGTTGAAGT TTATCTGA
 
Protein sequence
MNQPKKRILT GDRPTGRMHL GHYVGTLANR VRLQDEYECF FLVADLHMLT TRTELERLRQ 
TGENIRHVVL DNLSVGIDPE KSTYFLQSMV PAISEIALIF GMLTTVPRLQ RVPTLKEVMQ
DLHIEQPSYG LLGYPVLMAA DILCVRADLV PVGKDQASHL EVTREIARRF NTLYGEVLPE
PETLIGDVPT LVGIDGQAKM SKSLDNAIYL SDDARTVEEK VRRMYTDPNR VRADVPGRVE
GNPVFIYHDA FNPNVDEVND LKERYRQGKV GDVEVKRKLA AAINAFLEPI RERRAQYERN
PRIVEEILAA GSARARVEAD ETLNRMKEAM GLKFI