Gene RoseRS_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1446 
Symbol 
ID5208400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1759971 
End bp1760978 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content57% 
IMG OID640595055 
Producthypothetical protein 
Protein accessionYP_001275792 
Protein GI148655587 
COG category 
COG ID 
TIGRFAM ID[TIGR02584] CRISPR-associated protein, NE0113 family
[TIGR03642] CRISPR-associated protein, Csx13 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.282412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGA AACTACTCAT TGCAACGCTG GGCACTGCTC CAGCAGTGGT GACCGAGGCC 
GTGGACTTGC TGACCCAACA GAACTGCCGA CCGGACGGTG TCATCTTGCT CAGAACCGAA
GACCATGATG TTCGCGAAGC CTATGAGTTG CTGGCAACTC ATCTCCCTCA ACACGACAAC
TTGACCTGGG TGGAGCCTGT ATCCATCGGC CAGTACGGAG ACGTGGATAC CCCTGAGGCG
GCCGTAGAGT TTATGCAGGA GACATGCCGC ATTCTGAAGA CCTACCGCGA TGCAGGCTAC
CGACTTTTCG TGAGCATTGC TGGCGGCCGC AAAGCGATGT CGGCGCTTCT GGCCCTGGCC
GTGCAGTTCT ACGGCGCCGA ACGGCTGTTT CACATCTGGG TGCCGCCGTG GTTGGAGGCG
GAGGGCGAGA TTGCCCAATT CCGCAATCTC CCGGAAGAAG ATCTCATCCA GAAGCTACAT
CCGCCTCTGA ATACGATGAC TCCGGAGGAC CGCCCACGCC TGGTAGACCT GCCTTTCATC
GGCCTCTTCC CGTGGCTGGA AGATATCCGG GATGCACTGA AAGGTGTAGT TTCCCCTGAA
CGCTCCTTAA AGACTCTGTT GCAAGCCAAT AATTTGTTGG ACTCTCAGGC AAGGCCTACC
AAGCTGGGAA CTGCCGTTTT GACTATTCTG GAAGGCGTGG AGGGGTTACC CCCAGCACGT
CAGGAAGAGT GCAAAATTGC TATCGCCAAA CATCACGACC GCGATCGCCT GGAGCGCTTT
GCGCGGGAAC TCTGTAGCCG CTTTCCCTTT ATCACTCAGA CTCAAAGCGG CGAGTGGCGC
TCCGGTGAGG CGAAGGTCAA GGCGGAGTCA CCCAATCGCC TAAGGGTTTT TGAGTCTTTG
GGCAAGGATT TTCAGATGCA ACTGATCCTG GAAACGACGG CCACCACCTC TGGCCAACTG
GAAGCTGCCA GACGAGCCGT AGAGCGCTAC CTGGAGCGAA GGAGGTAG
 
Protein sequence
MSKKLLIATL GTAPAVVTEA VDLLTQQNCR PDGVILLRTE DHDVREAYEL LATHLPQHDN 
LTWVEPVSIG QYGDVDTPEA AVEFMQETCR ILKTYRDAGY RLFVSIAGGR KAMSALLALA
VQFYGAERLF HIWVPPWLEA EGEIAQFRNL PEEDLIQKLH PPLNTMTPED RPRLVDLPFI
GLFPWLEDIR DALKGVVSPE RSLKTLLQAN NLLDSQARPT KLGTAVLTIL EGVEGLPPAR
QEECKIAIAK HHDRDRLERF ARELCSRFPF ITQTQSGEWR SGEAKVKAES PNRLRVFESL
GKDFQMQLIL ETTATTSGQL EAARRAVERY LERRR