| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1420 |
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| Symbol | |
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| ID | 5208372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1729990 |
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| End bp | 1731237 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595031 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001275770 |
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| Protein GI | 148655565 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000217844 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0146408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCC GCTTTTCGCC CGCTGCTCGA GTTCCACCGA TAGCCCTGAT AGTGCTGGCG
TTCGTCCTTG CCGGGTGTGG CAACCTCGGC GGACTGCTCG GCGGACAACC GACCCCTGAA
CCGATCATTC TGATCGCAAC GGCGACTCCC GCACCGGTGT CTCAGGCGAC CGCCACGCTG
ACCGTTGCAC CATCGCCGAC CAGCGCGCCC TCCGACGATG CTACCGCCAC CCCTGCACCG
CCAACTGCGG AACCGCCCAC TCCCCCGCCG GCGCCGCAAA AGATCCTGGC GCGCGTCAAG
GAGCGCGGCT ACCTGATCTG TGGAACGAAC GCCGACCTGC CTGGGTTTGG CTTCTACGAT
AGCGTGCGCC AGACCTGGAG CGGCTTCGAT GTCGATTTCT GCCGCGCTGT CGCTGCCGCG
ATCTTCGGGG ATGCCACAAA AGTAGAGTTC GTCGCCCTCG GCACCGGACC AGGACCGAAC
AACCGGTTCG ATGCCGTGCG CGAGGGACGG GTCGACGTCC TGTTCCGCAA TACCACCTGG
ACATTGGGAC GGAACATCAG CGGTCTGGCG TTTGGTCCCA CGACCTTTCA CGACGGTCAG
ACCTTCATGG TACGCGCCAA AGACCGGATC ACGAAACTTG AAGATCTCGA AGGCAAGGTG
ATCTGTGTTG CAAAAGGCAC CACCAGCGAG CAGAACCTGA ACGACGACTT CGCCGCGCGC
GGCATCAGGT TCACTGCCCG CGTGCTTGAT GGCGAAGATG AACTCTACCC CGCCTACGAC
GAAGGCGAAT GCGATGCGGT GACCAGCGAC AGTTCCCAAC TGGCTGCCAA ACGTCAGCAA
CTCAAGAATC CTGCCGACCA CATCATTCTC GGCGACCGCA TCTCGCGCGA GCCGCTCGGT
CCCGTCATCG CCCGCGACGA CAACCAGTGG CTCGACGTGA TCAGCTGGAC GGTCTTTGCG
ACGATCTATG CAGAGGAGTT GCGTGTCGAC CAGCGCAACG TTGATCGGTT GCGCACCAGC
ACAACCGATC CGCGCATCAA ACGGTTGCTG GGGTTGGAAG GAAACTTTGG CGAGGGATTG
GGGCTACCGA ACGACTTCGC CTACCAGATC ATCAAGCAGG TCGGCAACTA CGGCGATATT
TACAACCGCA ACCTGGGACC AAACACTGTT ATCAACCTTG ACCGCGGACC GAACAAGGTC
TGGAATCTCG GCGCCGGCGG CGTGCTGGCG TCCCCGCCGT TCCGCTGA
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| Protein sequence | MHTRFSPAAR VPPIALIVLA FVLAGCGNLG GLLGGQPTPE PIILIATATP APVSQATATL
TVAPSPTSAP SDDATATPAP PTAEPPTPPP APQKILARVK ERGYLICGTN ADLPGFGFYD
SVRQTWSGFD VDFCRAVAAA IFGDATKVEF VALGTGPGPN NRFDAVREGR VDVLFRNTTW
TLGRNISGLA FGPTTFHDGQ TFMVRAKDRI TKLEDLEGKV ICVAKGTTSE QNLNDDFAAR
GIRFTARVLD GEDELYPAYD EGECDAVTSD SSQLAAKRQQ LKNPADHIIL GDRISREPLG
PVIARDDNQW LDVISWTVFA TIYAEELRVD QRNVDRLRTS TTDPRIKRLL GLEGNFGEGL
GLPNDFAYQI IKQVGNYGDI YNRNLGPNTV INLDRGPNKV WNLGAGGVLA SPPFR
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