Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1407 |
Symbol | |
ID | 5208359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1714646 |
End bp | 1715197 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640595018 |
Product | hypothetical protein |
Protein accession | YP_001275757 |
Protein GI | 148655552 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.168038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00353106 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATACGC AACCGAATGC GTCTCGCCAG CATCGCGCCT GGCGAGACGA AGGCGGCGCC GAGACGACGC CCATCATCGT CCTGAGCGCT CTCTGCATCC TCACGCTCCT GGCAGCCGTC GGGCTGGGAC TCGCGGTGCG TGACAGCGGT GCAGGATCCG CCATTGCGCG GCGGTTGACG CGACCTGTAT CGGGACTGAC GCCCGGCCTG TCTGGAACAG GCCCGCAGCA ACCGGGCATT TCGGGGGTGC ATATTTCAGC GCCGAATATT CAGGGGTCGT CCATTCAGGC GCCATCCCTG TCAGCGCCGA ATATTCAGGG GGCGTCCATT CAGGCGCCAT CCCTGTCAGT GCCGGATATT CAGGCGCCTG CCATTCCTGC GCCGGGCATT CATGGACCGA CCATCACCAC GCCGATCCCC GGCGCGCCTG GCGCTGCGAT GATGGCAGTC CCGGCGGTGA TGCTGCTGAT CGGGGTTGGC ATCGTCCTGG CGCTGGCGGC GTGCAGTCTT GTCTATTTTC GAGCGCGTGC GCGGGCGAGA CGAGCGGAGT AA
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Protein sequence | MNTQPNASRQ HRAWRDEGGA ETTPIIVLSA LCILTLLAAV GLGLAVRDSG AGSAIARRLT RPVSGLTPGL SGTGPQQPGI SGVHISAPNI QGSSIQAPSL SAPNIQGASI QAPSLSVPDI QAPAIPAPGI HGPTITTPIP GAPGAAMMAV PAVMLLIGVG IVLALAACSL VYFRARARAR RAE
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