Gene RoseRS_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1407 
Symbol 
ID5208359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1714646 
End bp1715197 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content65% 
IMG OID640595018 
Producthypothetical protein 
Protein accessionYP_001275757 
Protein GI148655552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.168038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00353106 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATACGC AACCGAATGC GTCTCGCCAG CATCGCGCCT GGCGAGACGA AGGCGGCGCC 
GAGACGACGC CCATCATCGT CCTGAGCGCT CTCTGCATCC TCACGCTCCT GGCAGCCGTC
GGGCTGGGAC TCGCGGTGCG TGACAGCGGT GCAGGATCCG CCATTGCGCG GCGGTTGACG
CGACCTGTAT CGGGACTGAC GCCCGGCCTG TCTGGAACAG GCCCGCAGCA ACCGGGCATT
TCGGGGGTGC ATATTTCAGC GCCGAATATT CAGGGGTCGT CCATTCAGGC GCCATCCCTG
TCAGCGCCGA ATATTCAGGG GGCGTCCATT CAGGCGCCAT CCCTGTCAGT GCCGGATATT
CAGGCGCCTG CCATTCCTGC GCCGGGCATT CATGGACCGA CCATCACCAC GCCGATCCCC
GGCGCGCCTG GCGCTGCGAT GATGGCAGTC CCGGCGGTGA TGCTGCTGAT CGGGGTTGGC
ATCGTCCTGG CGCTGGCGGC GTGCAGTCTT GTCTATTTTC GAGCGCGTGC GCGGGCGAGA
CGAGCGGAGT AA
 
Protein sequence
MNTQPNASRQ HRAWRDEGGA ETTPIIVLSA LCILTLLAAV GLGLAVRDSG AGSAIARRLT 
RPVSGLTPGL SGTGPQQPGI SGVHISAPNI QGSSIQAPSL SAPNIQGASI QAPSLSVPDI
QAPAIPAPGI HGPTITTPIP GAPGAAMMAV PAVMLLIGVG IVLALAACSL VYFRARARAR
RAE