| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1389 |
|---|
| Symbol | |
|---|
| ID | 5208341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1700205 |
|---|
| End bp | 1701011 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640595000 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001275739 |
|---|
| Protein GI | 148655534 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.26529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000124146 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCA GCGGCGGCGC GGCGGCGAAC GTCCCGCCCT GGCTGGCGGC GCTCGGACAG
GTATTCCTGG GACTGTTGAT CGGCGTCGGG GCGCTCCTGG CGCTGGCCGC GCTCATCTAC
GCAGGCGCCG CGCTCCTGGC AGCAGTGGGC ATCGGCGCCG CCCTCAGTTT CGCTGCTGCG
TTGGCGGTCG CCGCCGTCAT CCTCGCGGTC GGGTTCGTGG CGCTGGAGTT CTCTGAGCGC
ATGCAGGCAT TCCGGGCGCG GCGCGGCGAA CCGGGCGTCG GGGAATGGCT GCTGATCGCC
GGACTCAGCC TGGCTGCGCT GACCGGCGTC CCCCAGATCA TCGAGGCGCT GCGCGGCGCA
CAGTTGGTGA GCGAGCAACC GCTGTCCGAA GGTGAACGCT GGCGCCTGGG GCTCGGCGGC
GTGGTACAAT TGGCAGTAAT GCTGGCGGGC GTGCGCGTGG TACGGTCGCG GCTACGAACG
CGCCCGGCGC TGCAAGGAAC CGGCGCCGGG ACGGCGCCCG CGTCCCCTGC GCCCGCTCAA
GGACGCAGCG GCGGAGCGCC AGCTCCGGCG CCGAAGCGCC CCCCGCTCCC TGATGATCCT
GCTCAACCGC CTGCTCCCGG TTGGATGTGG CGCGGCAAGG ATCCGCCAGG CGGCATTAAG
GGGGCATGGT ACAATCCCAG CACTAAGGAA AGTCTCCATC CCGATCTGCA GCACCCGCCG
CCCATTGGAC CGCATTGGGA CTACAAGGAT GCATCAGGAA CCAGATGGCG CGTCTTCCCT
AATGGGCGCA TGGAGCCTGA AAAGTGA
|
|---|
| Protein sequence | MLASGGAAAN VPPWLAALGQ VFLGLLIGVG ALLALAALIY AGAALLAAVG IGAALSFAAA
LAVAAVILAV GFVALEFSER MQAFRARRGE PGVGEWLLIA GLSLAALTGV PQIIEALRGA
QLVSEQPLSE GERWRLGLGG VVQLAVMLAG VRVVRSRLRT RPALQGTGAG TAPASPAPAQ
GRSGGAPAPA PKRPPLPDDP AQPPAPGWMW RGKDPPGGIK GAWYNPSTKE SLHPDLQHPP
PIGPHWDYKD ASGTRWRVFP NGRMEPEK
|
|---|
| |