Gene RoseRS_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1379 
Symbol 
ID5208331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1690582 
End bp1692507 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content58% 
IMG OID640594990 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001275729 
Protein GI148655524 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.863708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0771449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTC ACCTGTTCTT CGTCTTCATC GCTCTGATCG CTCTGGTGCT CAACCGCACC 
GACTCGGGTA TGGCGGACAC GTCTCAATCT GCGGCGCCTC CGGCATGGGA AGGCGCCTTC
GTGCCGAATG AGATCCTTAT CGGCTTGAAG CCGGAAGCAG TGGCGCAGCT GACGCAACCA
GACGCGCGAT CCGATGCAGT GGGGGTTGCT TCGCTGGGAA TTGCATCGCT CGACCGCCTG
AGTCGCCGGT ATCATGTACA GGCGATTGTA CCGCTCTTCG ATGAGATCAG CCCTGCCGAT
CAGATCGCGC AAAACTACGG TCTCGATGGC GTCTACAAAG TCGTTGCACC GATCGGGGTC
GATATCTTTG CCATGATCGC AGACTATAGC GCCGATCCGG CCGTTGCATA CGCCGAGCCA
AACCGCATCT ATCAGGTAAC GGGGATCCCC AACGATCCCG ACTTCAGGAG ACAATGGGGG
CTGCACAACA CCGGACAGAC CGGCGGACGC GCCGATGCTG ACATTGATGC GCCGGAGGCG
TGGGATATCA CAACAGGATC GTCCTCGGTG CTTATCGCGG TGATCGATAC CGGCGTGGAT
TACAACCATC CTGATCTGCG TGGTGGTCGA GTGCGCACTG ATATCGACCG CGATTTTGCC
AACAACGACG AAGACGCAAT GGATGACCAC GGACACGGCA CCTTCGTTGC TGGCATTGCT
GCCGCCAGTG CGAATAACGA GCAGGGGATT GCCGGCGTCT GCCCTGATTG CCAGGTGCTG
CCGATAAAAG TGTTAACTAA TGATGGCAAG GGTTCGGCAG ACGTGGTAGC CAGGGGCATT
CAGTATGCCG CTCAGGCTGG CGCCAGGATT ATCAGCATGA GTCTGGGCGC GCCGTCTCAT
TGTGGTTGTT CACAGACAAT AGCCCGCGCG ATCAACTACG CATTCGATCG TGGCAGTCTG
CTTATTGCAG CATCTGGAAA TGACAGGGAC AAACAACGCA TCAGTTATCC GGCCTCCTCA
CCGCGTGTCA TGTCAGTGGG AGCGAGTGAT CATAATGATC AGGAAGCGCC CTTCTCCAAT
CGCAACAGTT ACCTCGATAT TATTGCGCCG GGAAAGGATA TTTACAGCCT GAAATCCGGC
GGCGGCTACG TTACGGAAAG CGGCACTTCG GCGGCAACTC CCTTCGTTTC CGGTGCGGCT
GGACTGATCT GGTCTGTCAA TCCTCAGTTG AGCAATGTGC AGGTCTGGTG GCGACTCTAT
CACTCGGCGG ATGATTTTCC TGCGCAACGT TCCGCTCAGA CCATCGAGAC CGCACCGACC
CCTGAAATAA CGGTCGATCC GGCACGCCTG GTCTTCCGGG TGTACCTGCC GACCATGTCG
CGTAGCCGTG TCACCTTTGG CCGTCTCAAT GCGCGCCAGG CGCTCGATAT CTCCGGCAGC
GGTCAAATGT TTGCACCGGT CGATACGTGC AGCGGCGAGC CTAAGAATTG TGCTCCGGGC
TGCGGCGCAG AAGTGGCGCT TACCGGCTCA ACGACGGGAT TGCACGATCT GGAGGTGTTG
CGCCGCTTCC GCGACGAGCA ACTGGCTTCC AGTGTGACAG GACAGCGCTG GATTGAGATC
TATGAACATC ACCGTCTGGA ACTTGCAACG TTACTGGCAG GTGACGCACA ACTCCGCACG
CAGGCGCGGG AGGCGCTCGA TCTCTGGCTG CCCCTCATTC GCGCACTGGT GGAGCCGGGT
TCGGAGGTTT CTGCGATTAT TCAACCTGAG CATATCCGTA CAGCGCGTCT GCTGATCGAG
AACCTGAGCG TCCGCAGCAG CCCTGAGATG CGGCGCGATC TGGACGAAGC CACGAAGGTT
GTGAATCGGG CAGAAACCTA TATCGGTCAG GATGTGCGTG TCTTCTGGAA TGTAATCACG
AGGTAA
 
Protein sequence
MRRHLFFVFI ALIALVLNRT DSGMADTSQS AAPPAWEGAF VPNEILIGLK PEAVAQLTQP 
DARSDAVGVA SLGIASLDRL SRRYHVQAIV PLFDEISPAD QIAQNYGLDG VYKVVAPIGV
DIFAMIADYS ADPAVAYAEP NRIYQVTGIP NDPDFRRQWG LHNTGQTGGR ADADIDAPEA
WDITTGSSSV LIAVIDTGVD YNHPDLRGGR VRTDIDRDFA NNDEDAMDDH GHGTFVAGIA
AASANNEQGI AGVCPDCQVL PIKVLTNDGK GSADVVARGI QYAAQAGARI ISMSLGAPSH
CGCSQTIARA INYAFDRGSL LIAASGNDRD KQRISYPASS PRVMSVGASD HNDQEAPFSN
RNSYLDIIAP GKDIYSLKSG GGYVTESGTS AATPFVSGAA GLIWSVNPQL SNVQVWWRLY
HSADDFPAQR SAQTIETAPT PEITVDPARL VFRVYLPTMS RSRVTFGRLN ARQALDISGS
GQMFAPVDTC SGEPKNCAPG CGAEVALTGS TTGLHDLEVL RRFRDEQLAS SVTGQRWIEI
YEHHRLELAT LLAGDAQLRT QAREALDLWL PLIRALVEPG SEVSAIIQPE HIRTARLLIE
NLSVRSSPEM RRDLDEATKV VNRAETYIGQ DVRVFWNVIT R