| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1363 |
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| Symbol | |
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| ID | 5208315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1672765 |
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| End bp | 1675224 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640594974 |
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| Product | spermine synthase |
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| Protein accession | YP_001275713 |
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| Protein GI | 148655508 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.871378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCTATA GTTACCCTGG CGCATATAAA GGCCATTGCT TTCCAGTTTC GAAGAGGAGG
CCTGGTTTGG AGTCAGATCG CGAGATCGCG CGCATTGATC TGCGGCTACT TCCCCGCACC
GAACAACTGG TATCGGTTGT CGCGCTCGTC ATTTTCTTCG CGTCCGGCTT TTCGGCGCTG
CTGTACCAGG TCATCTGGCA GCGGATGCTC GGCTTCTTCT CCGGAGCGGA TGTGTATTCG
GTTACGATCA TCGTTGCAGC ATACATGGCC GGCATGGGGG TTGGCAGTCT CACCGGGGGG
TATCTGGCAG ATCGCCTCTC GCGCTGGGGC AACCTGGCAT TGTTTGCCGG CGTCGAGCTG
GGCATCGCCC TCTTTGCGCT TGGCAGCAAA GGGCTGTACT ACGACTGGCT CTATCAGCAA
AACGCCCATC TTGCCTCGTC GCCATTCCTT ATGGCAGTGG TGCTGTTCGC CAGCCTGTTG
ATCCCGACCT TCTGCATGGG TGTTTCGCTG CCAGCGCTCG CGCGTGCACT CACCCGTTCA
ATTGAAATGG CAGCGGGCAC GATAGGTGCG CTCTACGGCG TCAACACCCT CGGCGCAGCC
GTCGGCGCCG GAGTGACGAC CTGGATTTTT CTGCGCCAGT ACAGTTTTGA AACCATCCTG
CTCATTGGTG CGGCGATCAA CGCGCTGGTG GCATTGACTG CATTTCCGCT GGCGCGGTTC
CTGATGCGAC CAGGAGGTGT GCAGCCATCC AGAGTCGCCT CGCGCACGGC GCCTGACGAA
CCGGCGCGCA CCAATCAGGC GACTATCAGA CAGTTGCCTG TGCCGGTCTG GATTGCACTC
TACGGTCTTT CCGGGTTCAT TGCGCTATCG CTGGAGATTC TTTGGTTTCG CATTCTGGGA
GTGATGCTGA AATCGATGGC ATTTACCTTT GGCACACTCC TCACCATTTT CCTGAGTGGG
CTGGCGTTGG GCACATTCCT CGGCATCAAA TGGGCGGTGC ACGCTCGTAA CCCGATGCGA
TCCTTCCTGC TGTTGCAATC CGGTGTCACA ATCTATGCGC TTGCCACATT AACGGCGTTT
GTCTCACTGA CAGGTCAGCT ACCATTGTTT GAACCCTTCT GGATCTACTT CGGTGGTTAT
GATCCCGTCC ATACAGGAAA TGCCATTGAT GCGCTGCCTG ATTTCTTTTT CAATCCGGGC
GCTCTGGAGA GCGAGGCGCT CAGCAATGCT CGCTTTTTCC TTGTGCTCTA TGTTGTGCTG
CCAGTCGTGC TGATCGGCGT ACCGACCATC TTGATGGGGA TGAGCTTCCC GTTGCTCCAG
AAAATCGTGC AGCGCGATCC GGAAACGCTG GGGAGACGTG TTGGCTGGTT GCAGACCTCG
AATATCATCG GCAGCATGCT CGGCACGCTG CTGACCGGTC TGGTTGCGCT CTCGTGGCTG
GGAACGCCGG ACAGCCTGCG TGCAGTCGGT CTTCTTTCCA GCACCTTTCT GCTACTGGCA
GCCTGGGGAT GCCTGAAGCG ACCATGGGTG CGACGTGGTG CGTATGCCGG AAGTATCGCC
TTCATGCTGA GTCTGGCATT TGCCGTACCC GATGCGCAAA CCTTTTGGGC GACGTTGCAC
GGCGCTCCGC CGGCGAATGT CATCGTTGCC GAAGACAATA CCGGAGTGGC GCTGATCAAG
AGCAGTAGAA GCGACTTTTC CAGACGATCA TTCGTGATGT CCAACGGGTT GGGACAGAGC
GCAATCCCTT ACGGGTGGAC ACAGAGCGTA CTAGGCTTTC TGCCCGCGCT GATCCATCCC
AACCCGCAAA CGATCGCCAT CATCGGGCTT GGTTCAGGCG ACACATTGTT TCATTCAGGG
GGACGTGCAG TAACGAAGGA AATCATCTGC ATCGAAATCG TTGGTTCGCA GATAAATATG
TTACGAGGAA TGGCGCAACG ACGCGAGTAC CCTGCGCTGC TCTCGATCCT GAACGACCCG
CGCATCACCT ATGTTATTGC TGATGGACGT TCATACATCA TGCAGAGCGG ACGTGGATTC
GATATTATCG AAGCTGATGC CCTGCGCCCG AATGGCGCCT ATTCCGGCAA TCTCTACTCA
GAAGAGTACT TCCGCCTGCT CCTCGACCAC CTGAACCCCG GCGGTCTGGC AGTGACCTGG
GTTCCAACCG AGCGTGTGCG CACAACATTT ATCCAGGTCT TTCCGCATTA CGTCGATTTC
GGCGACATTT TGATCGGCAG CAATGCCCCG ATTGACGTGG ACCTTCAGGC GATCTATCGC
CGACTCGAAG ACCCCTTCAC CCGTGAGTAC TATCAACGGT CTGGAGTAAA CATCGGACAA
TGGCTCGACG AGTACTTCGT CAAGCGTCAA CCGGTGGTTT CCGATCCATC GGCGCCGCGA
CCGCAATCGA CCGACACGAA CCGTGATCTG TTCCCGAAGG ACGAGTTCCT CGTGCGGTAG
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| Protein sequence | MCYSYPGAYK GHCFPVSKRR PGLESDREIA RIDLRLLPRT EQLVSVVALV IFFASGFSAL
LYQVIWQRML GFFSGADVYS VTIIVAAYMA GMGVGSLTGG YLADRLSRWG NLALFAGVEL
GIALFALGSK GLYYDWLYQQ NAHLASSPFL MAVVLFASLL IPTFCMGVSL PALARALTRS
IEMAAGTIGA LYGVNTLGAA VGAGVTTWIF LRQYSFETIL LIGAAINALV ALTAFPLARF
LMRPGGVQPS RVASRTAPDE PARTNQATIR QLPVPVWIAL YGLSGFIALS LEILWFRILG
VMLKSMAFTF GTLLTIFLSG LALGTFLGIK WAVHARNPMR SFLLLQSGVT IYALATLTAF
VSLTGQLPLF EPFWIYFGGY DPVHTGNAID ALPDFFFNPG ALESEALSNA RFFLVLYVVL
PVVLIGVPTI LMGMSFPLLQ KIVQRDPETL GRRVGWLQTS NIIGSMLGTL LTGLVALSWL
GTPDSLRAVG LLSSTFLLLA AWGCLKRPWV RRGAYAGSIA FMLSLAFAVP DAQTFWATLH
GAPPANVIVA EDNTGVALIK SSRSDFSRRS FVMSNGLGQS AIPYGWTQSV LGFLPALIHP
NPQTIAIIGL GSGDTLFHSG GRAVTKEIIC IEIVGSQINM LRGMAQRREY PALLSILNDP
RITYVIADGR SYIMQSGRGF DIIEADALRP NGAYSGNLYS EEYFRLLLDH LNPGGLAVTW
VPTERVRTTF IQVFPHYVDF GDILIGSNAP IDVDLQAIYR RLEDPFTREY YQRSGVNIGQ
WLDEYFVKRQ PVVSDPSAPR PQSTDTNRDL FPKDEFLVR
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