| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1360 |
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| Symbol | |
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| ID | 5208312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1668880 |
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| End bp | 1670904 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594971 |
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| Product | glycoside hydrolase, clan GH-D |
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| Protein accession | YP_001275710 |
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| Protein GI | 148655505 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG TTGGATCGGG TGACTCGTCT GAGACCTGGT CGATTGCGAC CGATCAGGTC
GATCTGGTTG TGTCGCTGGC GCACGGGCGC CTGACCTGGA CAATCGGCGG CGCAACTGGA
GGACTCGACC TGTCATCAGC GACCGGAACC TTCCTGCGCG TCAATGGTCA GACGCCGGTG
TGGACGCAGA TCGTCAATGT CGCTGAGCAC TCCGCCGATG ATGGCGGTCG GCTGCTGACC
CTGACGCTCG ATACGGCGGA TGGCAGAATG CGCTTGACTC GCCATTTCCA TCTGTTCGCC
GATCATCCAT TTGTGCGCAC CTGGGCGACG CTGGAAAACC GGAGCAGCGC CGTCCTGCTG
ATCGATCAGT GCGACATCCT GACGCTTGCA CCGCATGGCG AGCCGCCGCT GTATCTGTTT
CACGTCGAGC AGTTCAGCTG GAACTATCGG CGCGACTTTT TCAGCCAGCA TGAAGTATGG
TTGCGACCGG GGTGCGCTCC CCACGAGATC CGCATGGGTT CGTACCCTGC CCACCACTGG
GGTCCGTCCA GTTGCGCATG GTTCGCGCTA CGCGACGGTT TGCCCGATTG GAATGAAGAT
CCGCCGAAGC GTGGGCGCGG CATCGTGTGC GGCATCGAGT TCAACGGCAA GAGCCGATTG
CGCGCCTGGG CAACGACGGA ACAGGTGAGT CTTGTGAGCC AGATCGATGA TCTGGCGCAC
CGACTCGCGC CAGGTGCGAT CTTCGAGATA CCGGCGTATT TCGTCGGGCG CTTCGAGGGC
GATTGGGACG AGGCGGGGTA TGTGACGCAG CGCTTTGCCG GGGCGCACGT CCATCCCCCG
ATGCCCGATG ATCGCTACCC ATGGGTACAG TACAACTCCT GGCGGTATGA GCAGAACATC
AATGAAGAGC AGCAACTGGC GGCAATCGAC CGCTGCGCTG AATTGGGCAT CGAGCTGGCA
GTGATGGACC TCGGATGGGC GCGGATGATT GGCGACTGGC GCCCTGATCC GGTCAAGTTT
CCGCGCGGGT TGCGTCCGCT TGTTGAGCGT GCACATGCGT ATGGTATGCG GTTCGGCGTT
CACGTTGCAC TGGCGCAGTG CAATCCCGAT GCGCCGGTTG CCAGAGAGCA TCCTGACTGG
CTCATCCATA CCGGGAATGA TTACTACGGC GCAGGTCCGC TCTGCCTGGG GCACGAGCCG
TGTCGCGCCT GGCTCATCGA GCAACTCATA CGATTGATCG ACGAAGAGGG GATCGATTAC
ATCATCCAGG ATGGAGAGGA CATGGTGAAA CGGTGCGAGC GGAGCGATCA TACGCATGCG
CCGGGTGACA GCAACTATGC CAACTCCCAG TATGGGCTGG ATATCGTGAT CGAGTCGCTC
CGCCGCGCCC GTCCACATCT GGTGCTCGAA AATTGTGAGG ATGGCGGTTG TATGATGACG
TACAAAATGG CGCGACTGTA CCATACGAGC ATCACGGTGG ACAACACATC GTCCTACGCG
ACGCGACAGG GAGTCTATGG CGCTTCCTAT CCATTTTCGC CGCGCTACAG CGTGCGCTAT
ATGCAGGACG ATCCTTCGCG CTACACGCTG CGCAGTTCGA TCTTCGGCGG ACCACTCATC
CTGATGCAGC GCGTCACGGA ATGGAACGAA GCGCAGATGG CAGAAACCAG GCAGGCGATT
GAGCAGTACA AGGCGTTGCG CCATCTGATC CGTTCGGCGA AGATCATCCA CCTGAAAGCG
CCGCAGCACA ACATCGACGG TCTGGGGTGG GGATGGGACG CCATTCAGGC AGTCGCGCCG
GATACATCGC GCAGCGTCAT AATGGTCTAC CGCGCACGGG GCGATCTGGC TGAACGCACA
TTCAGGCCGC GCGGCTTACT CCCAGAGGCG CACTATGCGG TTCGGTTCGT TGATAGCGGA
CACACCCTCC AGTGCGCCGG CGCCGAACTG GAGCGCGATG GGATAACCAT AACGCTCGAT
GAATTCGACT CGGAGATTGT GATGCTGGAG AGGGTTGAAG GTTGA
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| Protein sequence | MTRVGSGDSS ETWSIATDQV DLVVSLAHGR LTWTIGGATG GLDLSSATGT FLRVNGQTPV
WTQIVNVAEH SADDGGRLLT LTLDTADGRM RLTRHFHLFA DHPFVRTWAT LENRSSAVLL
IDQCDILTLA PHGEPPLYLF HVEQFSWNYR RDFFSQHEVW LRPGCAPHEI RMGSYPAHHW
GPSSCAWFAL RDGLPDWNED PPKRGRGIVC GIEFNGKSRL RAWATTEQVS LVSQIDDLAH
RLAPGAIFEI PAYFVGRFEG DWDEAGYVTQ RFAGAHVHPP MPDDRYPWVQ YNSWRYEQNI
NEEQQLAAID RCAELGIELA VMDLGWARMI GDWRPDPVKF PRGLRPLVER AHAYGMRFGV
HVALAQCNPD APVAREHPDW LIHTGNDYYG AGPLCLGHEP CRAWLIEQLI RLIDEEGIDY
IIQDGEDMVK RCERSDHTHA PGDSNYANSQ YGLDIVIESL RRARPHLVLE NCEDGGCMMT
YKMARLYHTS ITVDNTSSYA TRQGVYGASY PFSPRYSVRY MQDDPSRYTL RSSIFGGPLI
LMQRVTEWNE AQMAETRQAI EQYKALRHLI RSAKIIHLKA PQHNIDGLGW GWDAIQAVAP
DTSRSVIMVY RARGDLAERT FRPRGLLPEA HYAVRFVDSG HTLQCAGAEL ERDGITITLD
EFDSEIVMLE RVEG
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