| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1351 |
|---|
| Symbol | |
|---|
| ID | 5208303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1658954 |
|---|
| End bp | 1659934 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640594962 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_001275701 |
|---|
| Protein GI | 148655496 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0591538 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATCC TGAGCGCTGA CGATGTGCGA CGCGCAGTGA CCATGCCTGC TGCTATCGAT
GCGGTTTCCT CCGCTTTTGT GCAACTCTCG ACCGGGCGCG CCACCGTGCC GCTGCGCGCA
CACCTCCAGC AACGCGTTCA CGAATCGCAC ACATTCGTGA TGCCAGCGCT GCTGGAAGAG
AGCGGCGGTT TGGGGTTGAA GGTCGTGTCG GTCTTTCCGC ACAATGCTGC GCGCCACGGT
CTACCGGCCA TTCATGCGCT CGTCGTGGTC CTCGATGCTG CGACCGGTCA ACCCGCAGCG
GTGCTCGACG GATCGTACCT GACGGCGCTT CGCACCGGTG CGGCGTCGGG TGCGGCAACC
CGCGCGCTCG CCCGCCACGA TGCGCAGGTG CTGGCGATCA TTGGCGCCGG TGCGCAGGCG
TATCATCAGG TCGAAGCGGT ATGCGCCGTG CGCCCGATCG AGCGTGTGAT CATCGTCAAC
CGCAGCCGCG AGCGCGCTGA ACGCCTGGCG GCAATGCTGC GCGAGCGTGC AATTGCGCCA
CATATCGACA TCGCTGCATC ATCTGCCGAA GCGCTCCCAC AGGCGGACGT CATCTGCTGC
GCAACATCTT CGCCGATGCC AGTCTTCGAC GATGCCAGCC TGCGTCCCGG CGTCCATATT
AACGGTATCG GCTCGTTCAC GCCACAGATG GTCGAAGTGC CGCCGGAAAC CGTCGGGCGG
GCGTATGTCG TCGTTGATCA GCACACAGCG GCATGGGCAG AGGCAGGCGA TCTGCAGCAC
GCCAGAGGTC TGGGGTTGCT CGACGAGTCG CAGACGGTCG AGTTGGGTGC AGTTATCGCT
GGAATTGTTC CCGCGCGCAC GAGCGATGAT CAGATCACCT TCTTCAAATC GGTCGGCAAT
GCTGTTCAGG ACATCGCTGT GGCGCAACTG GCGCTGCGCG AAGCGGAGCG TCTCAATCTC
GGCATCGATA TCGATCTCTG A
|
|---|
| Protein sequence | MRILSADDVR RAVTMPAAID AVSSAFVQLS TGRATVPLRA HLQQRVHESH TFVMPALLEE
SGGLGLKVVS VFPHNAARHG LPAIHALVVV LDAATGQPAA VLDGSYLTAL RTGAASGAAT
RALARHDAQV LAIIGAGAQA YHQVEAVCAV RPIERVIIVN RSRERAERLA AMLRERAIAP
HIDIAASSAE ALPQADVICC ATSSPMPVFD DASLRPGVHI NGIGSFTPQM VEVPPETVGR
AYVVVDQHTA AWAEAGDLQH ARGLGLLDES QTVELGAVIA GIVPARTSDD QITFFKSVGN
AVQDIAVAQL ALREAERLNL GIDIDL
|
|---|
| |