| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1302 |
|---|
| Symbol | tgt |
|---|
| ID | 5208254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1604515 |
|---|
| End bp | 1605717 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640594917 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_001275656 |
|---|
| Protein GI | 148655451 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTGG CATTCGATAT CGAAGCGCGC GATCCGCATA GTCGCGCCCG CGCAGGGCGC
ATCACCACTG CCCATGGAGT GATCGAGACG CCGGTTTTTA TGCCGGTTGG CACGCGGGGA
TCGATAAAAT CGCTGACACC CGATGAAGTG CGCAATCACG GCGCACAGAT TATCCTTGGC
AATACCTATC ATCTCTACTT GCAACCCGGT CACGAATTGA TTGCCCGTAT GGGTGGATTG
CACCACTTTA TGGGGTGGGA CGGTCCTATT CTGACCGATA GTGGCGGATT TCAGGTGTTT
AGCCTGGTGT ATGGCGGTAT TGCCGATGAG ATCAAAGGTC GGCGACCGAC GCAACAGGTT
CAGCCTGGTA TGGTTAAAGT CACCGATGAT GCCGTGATTT TCAAATCGTA TATCGATGGT
TCCATGCATG TGTTTACGCC TGAACGCAGT ATCGAGATTC AGAAAGGCAT TGGCGCTGAT
ATTATCCTTT GCTTTGATGA GTTGCCGCCG TTTCACGCCG GCTACGATTA TACGGCGCGT
TCGCTGGAAC GCACCCACGC CTGGGAGCGA CGCTGTCTGA TGTTCCACCG GGCGACGCAG
GAAGGCGGGT TGCCGTTCGT GCCGCCGAAT CCGTATCAGG CGTTGTTCGG CATCGTTCAT
GGCGGGGTCT TTCCCGATCT GCGACGGGCA AGCGCCGAGT ATCTGCGCGA ATTGCCGTTC
GATGGGTTAT GTATTGGCGG GTCGCTCGGC GAAAACAAAC AGCAGATGCG CGAGGTGGTG
GATATGACCG TGCCGCATAT GCCTGATCAT CTACCGCGCC ATCTGTTAGG TATTGGTGAT
GTGGACGACC TGATCGAATG CGTGGCGCGC GGGATCGATA TGTTTGATTG CGTCAGCCCA
ACGCGCCTTG GTCGCCATGG CACGGCGCTG GTGCGCGATG CGGAACGTCG CTGGAAATTG
AATGTCGCCA ATGCTGCGCT GCGCGACGAC CCGACCCCGC TGGATGCCTG GTGTGACTGC
TATACGTGCC GCCGCTATTC GCGCGCCTAT ATTCACCACC TGTTCCGTGC GCAGGAACTG
CTCGGCATTC GACTGGTCAG CCTGCACAAT GTCGCGTTCC TGCTCAAATT GATGCGCACC
ATCCGGCAGA GTATTATCGA AGGTCGTTTT GCGCATCTAC GGGCGGAGTG GCTGGGGATC
TGA
|
|---|
| Protein sequence | MTLAFDIEAR DPHSRARAGR ITTAHGVIET PVFMPVGTRG SIKSLTPDEV RNHGAQIILG
NTYHLYLQPG HELIARMGGL HHFMGWDGPI LTDSGGFQVF SLVYGGIADE IKGRRPTQQV
QPGMVKVTDD AVIFKSYIDG SMHVFTPERS IEIQKGIGAD IILCFDELPP FHAGYDYTAR
SLERTHAWER RCLMFHRATQ EGGLPFVPPN PYQALFGIVH GGVFPDLRRA SAEYLRELPF
DGLCIGGSLG ENKQQMREVV DMTVPHMPDH LPRHLLGIGD VDDLIECVAR GIDMFDCVSP
TRLGRHGTAL VRDAERRWKL NVANAALRDD PTPLDAWCDC YTCRRYSRAY IHHLFRAQEL
LGIRLVSLHN VAFLLKLMRT IRQSIIEGRF AHLRAEWLGI
|
|---|
| |