Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1286 |
Symbol | |
ID | 5208238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1591461 |
End bp | 1592795 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640594901 |
Product | signal recognition particle protein |
Protein accession | YP_001275640 |
Protein GI | 148655435 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.524326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAA GTCTCTCCGA CCGATTGCAG GCGGTCTTTC AAAAACTCGG CGGGAAAGGC AAACTGACCG AGGACGACGT GCGCGAGGCG ATGAAACAGG TGCGCATCGC GCTGCTCGAG GCGGATGTCA ACCTCAAAGT GGTGCGCGAT TTCGTCGCGC GCGTCACCGA AAAAGCGATC GGCGAAGAGG TTGCGAAAAG CCTGACGCCA GTCCAGCAGG TGATTAAGAT CGTTCACCAG GAACTGATCG ACCTGCTTGG ACAGGCGAAT GTGCCGCTCG CTGAAGCGCG TCCGGGTCCG ACGGTCATCA TGCTGATCGG TTTGCAGGGT TCCGGTAAGA CGACCACCGC CGCCAAACTG GCGCTCTGGC TGCGCAAGAA AGGCAAACGA CCGCTCCTGG TCGCCGCCGA CATCTATCGC CCGGCAGCCA TCACGCAACT CGAATCGCTG GGGCGTCAGC TGGGCATCCC GGTGCATGCG GAAGGCACAC AGGTCAGCCC GCCGGAGATC GCGCGCCACG CGCTGCGCCG CGCCCGCGAC GAAAACCTGA CCCACGTTAT CATCGATACC GCCGGTCGGC TTCAGATTGA TGAGCCGCTC ATGGCGGAAC TGGAACAGAT CAACGCCGCC GTCGACCCGG TCGAGCGGTT GCTGGTCGTC GATGCAATGA TCGGTCAGGA GGCAGTGCGC GTTGCTGAGG AGTTCAACCG GCGCGTGGGA CTGACCGGCG TCATCTTCAC CAAGGTCGAT GGCGATGCAC GCGGCGGCGC CGCCCTGTCG GTGCGCGCCG TCACCGGCGT GCCGATCAAG TTCCTCGGTT CGGGCGAAAA GGTTGAAGCC AGCACGATCG AGCCGTTCCA CCCGGACCGA CTGGCGTCGC GCATTCTGGG CATGGGGGAT GTGCTGTCGC TGATCGAGCG CGCCGAAGCG ATCTACGACG AAGAGCAGGC GCGCAAAATG CAGAAGAAAC TGGTCAAGGG GTCGTTCGAC TTCGAGGACT TCCTGGTTTC GATGCAGCAG ATGCGCAAAC TCGGTCCGCT TCAGCAGATC CTGGGCATGA TTCCGGGGCT GGACAAACTG GCGCGCGAGG AGATCATCAC CGAAAAGGAC TTGAAAAAGA TCGAAGCGAT CATCTTTTCG ATGACGAAGG AAGAACGCCG CAACCCCGAC CTGATCAAGG GTCGGCGCAA AGAGCGCATT GCGCGCGGTA GTGGCACACA GGTTCAGGAA GTGACGCAAC TGGTCAATCA GTTCCGCCAG ATGCAGCGGA TGATGAAACG AATGGGCGGC AAAGGCGGTA TCGATCCGCG CGAGTTGATG CGTCGGATGC GTTAG
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Protein sequence | MFESLSDRLQ AVFQKLGGKG KLTEDDVREA MKQVRIALLE ADVNLKVVRD FVARVTEKAI GEEVAKSLTP VQQVIKIVHQ ELIDLLGQAN VPLAEARPGP TVIMLIGLQG SGKTTTAAKL ALWLRKKGKR PLLVAADIYR PAAITQLESL GRQLGIPVHA EGTQVSPPEI ARHALRRARD ENLTHVIIDT AGRLQIDEPL MAELEQINAA VDPVERLLVV DAMIGQEAVR VAEEFNRRVG LTGVIFTKVD GDARGGAALS VRAVTGVPIK FLGSGEKVEA STIEPFHPDR LASRILGMGD VLSLIERAEA IYDEEQARKM QKKLVKGSFD FEDFLVSMQQ MRKLGPLQQI LGMIPGLDKL AREEIITEKD LKKIEAIIFS MTKEERRNPD LIKGRRKERI ARGSGTQVQE VTQLVNQFRQ MQRMMKRMGG KGGIDPRELM RRMR
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