Gene RoseRS_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1286 
Symbol 
ID5208238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1591461 
End bp1592795 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content61% 
IMG OID640594901 
Productsignal recognition particle protein 
Protein accessionYP_001275640 
Protein GI148655435 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.524326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAA GTCTCTCCGA CCGATTGCAG GCGGTCTTTC AAAAACTCGG CGGGAAAGGC 
AAACTGACCG AGGACGACGT GCGCGAGGCG ATGAAACAGG TGCGCATCGC GCTGCTCGAG
GCGGATGTCA ACCTCAAAGT GGTGCGCGAT TTCGTCGCGC GCGTCACCGA AAAAGCGATC
GGCGAAGAGG TTGCGAAAAG CCTGACGCCA GTCCAGCAGG TGATTAAGAT CGTTCACCAG
GAACTGATCG ACCTGCTTGG ACAGGCGAAT GTGCCGCTCG CTGAAGCGCG TCCGGGTCCG
ACGGTCATCA TGCTGATCGG TTTGCAGGGT TCCGGTAAGA CGACCACCGC CGCCAAACTG
GCGCTCTGGC TGCGCAAGAA AGGCAAACGA CCGCTCCTGG TCGCCGCCGA CATCTATCGC
CCGGCAGCCA TCACGCAACT CGAATCGCTG GGGCGTCAGC TGGGCATCCC GGTGCATGCG
GAAGGCACAC AGGTCAGCCC GCCGGAGATC GCGCGCCACG CGCTGCGCCG CGCCCGCGAC
GAAAACCTGA CCCACGTTAT CATCGATACC GCCGGTCGGC TTCAGATTGA TGAGCCGCTC
ATGGCGGAAC TGGAACAGAT CAACGCCGCC GTCGACCCGG TCGAGCGGTT GCTGGTCGTC
GATGCAATGA TCGGTCAGGA GGCAGTGCGC GTTGCTGAGG AGTTCAACCG GCGCGTGGGA
CTGACCGGCG TCATCTTCAC CAAGGTCGAT GGCGATGCAC GCGGCGGCGC CGCCCTGTCG
GTGCGCGCCG TCACCGGCGT GCCGATCAAG TTCCTCGGTT CGGGCGAAAA GGTTGAAGCC
AGCACGATCG AGCCGTTCCA CCCGGACCGA CTGGCGTCGC GCATTCTGGG CATGGGGGAT
GTGCTGTCGC TGATCGAGCG CGCCGAAGCG ATCTACGACG AAGAGCAGGC GCGCAAAATG
CAGAAGAAAC TGGTCAAGGG GTCGTTCGAC TTCGAGGACT TCCTGGTTTC GATGCAGCAG
ATGCGCAAAC TCGGTCCGCT TCAGCAGATC CTGGGCATGA TTCCGGGGCT GGACAAACTG
GCGCGCGAGG AGATCATCAC CGAAAAGGAC TTGAAAAAGA TCGAAGCGAT CATCTTTTCG
ATGACGAAGG AAGAACGCCG CAACCCCGAC CTGATCAAGG GTCGGCGCAA AGAGCGCATT
GCGCGCGGTA GTGGCACACA GGTTCAGGAA GTGACGCAAC TGGTCAATCA GTTCCGCCAG
ATGCAGCGGA TGATGAAACG AATGGGCGGC AAAGGCGGTA TCGATCCGCG CGAGTTGATG
CGTCGGATGC GTTAG
 
Protein sequence
MFESLSDRLQ AVFQKLGGKG KLTEDDVREA MKQVRIALLE ADVNLKVVRD FVARVTEKAI 
GEEVAKSLTP VQQVIKIVHQ ELIDLLGQAN VPLAEARPGP TVIMLIGLQG SGKTTTAAKL
ALWLRKKGKR PLLVAADIYR PAAITQLESL GRQLGIPVHA EGTQVSPPEI ARHALRRARD
ENLTHVIIDT AGRLQIDEPL MAELEQINAA VDPVERLLVV DAMIGQEAVR VAEEFNRRVG
LTGVIFTKVD GDARGGAALS VRAVTGVPIK FLGSGEKVEA STIEPFHPDR LASRILGMGD
VLSLIERAEA IYDEEQARKM QKKLVKGSFD FEDFLVSMQQ MRKLGPLQQI LGMIPGLDKL
AREEIITEKD LKKIEAIIFS MTKEERRNPD LIKGRRKERI ARGSGTQVQE VTQLVNQFRQ
MQRMMKRMGG KGGIDPRELM RRMR